Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRDV1A0A1B0GX56 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRDV1A0A1B0GX56 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRDV1A0A1B0GX56 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRDV1A0A1B0GX56 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.16■□□□□ 0.82
TRDV1A0A1B0GX56 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRDV1A0A1B0GX56 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRDV1A0A1B0GX56 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRDV1A0A1B0GX56 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.16■□□□□ 0.82
TRDV1A0A1B0GX56 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRDV1A0A1B0GX56 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRDV1A0A1B0GX56 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
TRDV1A0A1B0GX56 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRDV1A0A1B0GX56 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.15■□□□□ 0.82
TRDV1A0A1B0GX56 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRDV1A0A1B0GX56 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRDV1A0A1B0GX56 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRDV1A0A1B0GX56 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRDV1A0A1B0GX56 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
TRDV1A0A1B0GX56 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.15■□□□□ 0.82
TRDV1A0A1B0GX56 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.15■□□□□ 0.82
TRDV1A0A1B0GX56 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRDV1A0A1B0GX56 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.15■□□□□ 0.82
TRDV1A0A1B0GX56 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRDV1A0A1B0GX56 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRDV1A0A1B0GX56 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRDV1A0A1B0GX56 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
TRDV1A0A1B0GX56 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.14■□□□□ 0.82
TRDV1A0A1B0GX56 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.14■□□□□ 0.82
TRDV1A0A1B0GX56 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRDV1A0A1B0GX56 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.14■□□□□ 0.81
TRDV1A0A1B0GX56 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
TRDV1A0A1B0GX56 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.14■□□□□ 0.81
TRDV1A0A1B0GX56 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
TRDV1A0A1B0GX56 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRDV1A0A1B0GX56 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRDV1A0A1B0GX56 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRDV1A0A1B0GX56 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TRDV1A0A1B0GX56 SMPD5-203ENST00000639008 1464 ntBASIC20.13■□□□□ 0.81
TRDV1A0A1B0GX56 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC20.13■□□□□ 0.81
TRDV1A0A1B0GX56 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
TRDV1A0A1B0GX56 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
TRDV1A0A1B0GX56 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRDV1A0A1B0GX56 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.13■□□□□ 0.81
TRDV1A0A1B0GX56 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.13■□□□□ 0.81
TRDV1A0A1B0GX56 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRDV1A0A1B0GX56 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
TRDV1A0A1B0GX56 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRDV1A0A1B0GX56 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRDV1A0A1B0GX56 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRDV1A0A1B0GX56 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRDV1A0A1B0GX56 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRDV1A0A1B0GX56 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.12■□□□□ 0.81
TRDV1A0A1B0GX56 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.12■□□□□ 0.81
TRDV1A0A1B0GX56 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.12■□□□□ 0.81
TRDV1A0A1B0GX56 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
TRDV1A0A1B0GX56 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.12■□□□□ 0.81
TRDV1A0A1B0GX56 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRDV1A0A1B0GX56 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRDV1A0A1B0GX56 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC20.11■□□□□ 0.81
TRDV1A0A1B0GX56 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRDV1A0A1B0GX56 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRDV1A0A1B0GX56 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRDV1A0A1B0GX56 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
TRDV1A0A1B0GX56 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRDV1A0A1B0GX56 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRDV1A0A1B0GX56 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
TRDV1A0A1B0GX56 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRDV1A0A1B0GX56 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
TRDV1A0A1B0GX56 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRDV1A0A1B0GX56 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
TRDV1A0A1B0GX56 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.1■□□□□ 0.81
TRDV1A0A1B0GX56 AL161729.1-201ENST00000604104 1402 ntBASIC20.1■□□□□ 0.81
TRDV1A0A1B0GX56 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
TRDV1A0A1B0GX56 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRDV1A0A1B0GX56 KRT18P10-201ENST00000388836 1287 ntBASIC20.09■□□□□ 0.81
TRDV1A0A1B0GX56 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.09■□□□□ 0.81
TRDV1A0A1B0GX56 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.09■□□□□ 0.81
TRDV1A0A1B0GX56 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.09■□□□□ 0.81
TRDV1A0A1B0GX56 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.09■□□□□ 0.81
TRDV1A0A1B0GX56 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
TRDV1A0A1B0GX56 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.09■□□□□ 0.81
TRDV1A0A1B0GX56 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
TRDV1A0A1B0GX56 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
TRDV1A0A1B0GX56 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRDV1A0A1B0GX56 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.08■□□□□ 0.81
TRDV1A0A1B0GX56 AC007375.3-201ENST00000600936 2314 ntBASIC20.08■□□□□ 0.81
TRDV1A0A1B0GX56 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
TRDV1A0A1B0GX56 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRDV1A0A1B0GX56 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRDV1A0A1B0GX56 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRDV1A0A1B0GX56 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
TRDV1A0A1B0GX56 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRDV1A0A1B0GX56 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRDV1A0A1B0GX56 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
TRDV1A0A1B0GX56 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
TRDV1A0A1B0GX56 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRDV1A0A1B0GX56 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
TRDV1A0A1B0GX56 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
TRDV1A0A1B0GX56 AC242852.2-201ENST00000615738 1807 ntBASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms