Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC16.13■□□□□ 0.17
TRBV6-4A0A1B0GX49 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC16.13■□□□□ 0.17
TRBV6-4A0A1B0GX49 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-4A0A1B0GX49 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC16.13■□□□□ 0.17
TRBV6-4A0A1B0GX49 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC16.13■□□□□ 0.17
TRBV6-4A0A1B0GX49 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-4A0A1B0GX49 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRBV6-4A0A1B0GX49 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-4A0A1B0GX49 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-4A0A1B0GX49 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-4A0A1B0GX49 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-4A0A1B0GX49 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
TRBV6-4A0A1B0GX49 EI24-213ENST00000618552 1747 ntTSL 5 BASIC16.12■□□□□ 0.17
TRBV6-4A0A1B0GX49 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC16.12■□□□□ 0.17
TRBV6-4A0A1B0GX49 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-4A0A1B0GX49 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-4A0A1B0GX49 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TRBV6-4A0A1B0GX49 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC16.12■□□□□ 0.17
TRBV6-4A0A1B0GX49 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-4A0A1B0GX49 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-4A0A1B0GX49 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-4A0A1B0GX49 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRBV6-4A0A1B0GX49 DUSP8P5-201ENST00000422884 1815 ntBASIC16.12■□□□□ 0.17
TRBV6-4A0A1B0GX49 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-4A0A1B0GX49 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-4A0A1B0GX49 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-4A0A1B0GX49 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-4A0A1B0GX49 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC16.11■□□□□ 0.17
TRBV6-4A0A1B0GX49 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC16.11■□□□□ 0.17
TRBV6-4A0A1B0GX49 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-4A0A1B0GX49 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRBV6-4A0A1B0GX49 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC16.11■□□□□ 0.17
TRBV6-4A0A1B0GX49 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
TRBV6-4A0A1B0GX49 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-4A0A1B0GX49 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TRBV6-4A0A1B0GX49 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-4A0A1B0GX49 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC16.11■□□□□ 0.17
TRBV6-4A0A1B0GX49 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-4A0A1B0GX49 ALDH1A3-203ENST00000557963 1670 ntBASIC16.11■□□□□ 0.17
TRBV6-4A0A1B0GX49 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-4A0A1B0GX49 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRBV6-4A0A1B0GX49 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-4A0A1B0GX49 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-4A0A1B0GX49 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-4A0A1B0GX49 AF131216.4-201ENST00000638924 1588 ntBASIC16.1■□□□□ 0.17
TRBV6-4A0A1B0GX49 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TRBV6-4A0A1B0GX49 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRBV6-4A0A1B0GX49 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
TRBV6-4A0A1B0GX49 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-4A0A1B0GX49 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-4A0A1B0GX49 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-4A0A1B0GX49 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-4A0A1B0GX49 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-4A0A1B0GX49 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-4A0A1B0GX49 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRBV6-4A0A1B0GX49 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-4A0A1B0GX49 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC16.09■□□□□ 0.17
TRBV6-4A0A1B0GX49 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRBV6-4A0A1B0GX49 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRBV6-4A0A1B0GX49 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC16.09■□□□□ 0.17
TRBV6-4A0A1B0GX49 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRBV6-4A0A1B0GX49 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-4A0A1B0GX49 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC16.09■□□□□ 0.17
TRBV6-4A0A1B0GX49 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRBV6-4A0A1B0GX49 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
TRBV6-4A0A1B0GX49 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
TRBV6-4A0A1B0GX49 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-4A0A1B0GX49 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-4A0A1B0GX49 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC16.08■□□□□ 0.16
TRBV6-4A0A1B0GX49 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC16.08■□□□□ 0.16
TRBV6-4A0A1B0GX49 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC16.08■□□□□ 0.16
TRBV6-4A0A1B0GX49 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-4A0A1B0GX49 LSM7-203ENST00000585409 512 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBV6-4A0A1B0GX49 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-4A0A1B0GX49 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC16.08■□□□□ 0.16
TRBV6-4A0A1B0GX49 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-4A0A1B0GX49 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-4A0A1B0GX49 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-4A0A1B0GX49 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC16.08■□□□□ 0.16
TRBV6-4A0A1B0GX49 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
TRBV6-4A0A1B0GX49 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRBV6-4A0A1B0GX49 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-4A0A1B0GX49 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-4A0A1B0GX49 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-4A0A1B0GX49 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRBV6-4A0A1B0GX49 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRBV6-4A0A1B0GX49 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-4A0A1B0GX49 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-4A0A1B0GX49 EI24-204ENST00000527235 1625 ntTSL 5 BASIC16.07■□□□□ 0.16
TRBV6-4A0A1B0GX49 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-4A0A1B0GX49 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-4A0A1B0GX49 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC16.07■□□□□ 0.16
TRBV6-4A0A1B0GX49 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-4A0A1B0GX49 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC16.07■□□□□ 0.16
TRBV6-4A0A1B0GX49 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-4A0A1B0GX49 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-4A0A1B0GX49 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRBV6-4A0A1B0GX49 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRBV6-4A0A1B0GX49 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRBV6-4A0A1B0GX49 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms