Protein–RNA interactions for Protein: A0A1B0GVV1

SMIM35, Small integral membrane protein 35, humanhuman

Predictions only

Length 85 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM35A0A1B0GVV1 AC092171.4-201ENST00000609130 632 ntBASIC25.25■■□□□ 1.63
SMIM35A0A1B0GVV1 SF1-220ENST00000626028 704 ntTSL 2 BASIC25.25■■□□□ 1.63
SMIM35A0A1B0GVV1 AC009102.2-201ENST00000606772 1639 ntBASIC25.25■■□□□ 1.63
SMIM35A0A1B0GVV1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC25.25■■□□□ 1.63
SMIM35A0A1B0GVV1 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
SMIM35A0A1B0GVV1 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SMIM35A0A1B0GVV1 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SMIM35A0A1B0GVV1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SMIM35A0A1B0GVV1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC25.24■■□□□ 1.63
SMIM35A0A1B0GVV1 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
SMIM35A0A1B0GVV1 EDA-201ENST00000338901 1233 ntBASIC25.24■■□□□ 1.63
SMIM35A0A1B0GVV1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.24■■□□□ 1.63
SMIM35A0A1B0GVV1 SUDS3P1-201ENST00000505831 966 ntBASIC25.24■■□□□ 1.63
SMIM35A0A1B0GVV1 AC142381.2-201ENST00000566120 298 ntBASIC25.24■■□□□ 1.63
SMIM35A0A1B0GVV1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
SMIM35A0A1B0GVV1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC25.24■■□□□ 1.63
SMIM35A0A1B0GVV1 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
SMIM35A0A1B0GVV1 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.24■■□□□ 1.63
SMIM35A0A1B0GVV1 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
SMIM35A0A1B0GVV1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
SMIM35A0A1B0GVV1 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC25.23■■□□□ 1.63
SMIM35A0A1B0GVV1 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC25.23■■□□□ 1.63
SMIM35A0A1B0GVV1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.23■■□□□ 1.63
SMIM35A0A1B0GVV1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC25.23■■□□□ 1.63
SMIM35A0A1B0GVV1 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC25.23■■□□□ 1.63
SMIM35A0A1B0GVV1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC25.22■■□□□ 1.63
SMIM35A0A1B0GVV1 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC25.22■■□□□ 1.63
SMIM35A0A1B0GVV1 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMIM35A0A1B0GVV1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.22■■□□□ 1.63
SMIM35A0A1B0GVV1 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC25.22■■□□□ 1.63
SMIM35A0A1B0GVV1 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC25.22■■□□□ 1.63
SMIM35A0A1B0GVV1 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.22■■□□□ 1.63
SMIM35A0A1B0GVV1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC25.21■■□□□ 1.63
SMIM35A0A1B0GVV1 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC25.21■■□□□ 1.63
SMIM35A0A1B0GVV1 AL355001.2-201ENST00000620617 1191 ntBASIC25.21■■□□□ 1.63
SMIM35A0A1B0GVV1 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SMIM35A0A1B0GVV1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
SMIM35A0A1B0GVV1 SYT6-210ENST00000641643 1587 ntBASIC25.21■■□□□ 1.63
SMIM35A0A1B0GVV1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.21■■□□□ 1.63
SMIM35A0A1B0GVV1 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC25.2■■□□□ 1.62
SMIM35A0A1B0GVV1 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SMIM35A0A1B0GVV1 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
SMIM35A0A1B0GVV1 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SMIM35A0A1B0GVV1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC25.19■■□□□ 1.62
SMIM35A0A1B0GVV1 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
SMIM35A0A1B0GVV1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.19■■□□□ 1.62
SMIM35A0A1B0GVV1 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
SMIM35A0A1B0GVV1 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SMIM35A0A1B0GVV1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SMIM35A0A1B0GVV1 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
SMIM35A0A1B0GVV1 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
SMIM35A0A1B0GVV1 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
SMIM35A0A1B0GVV1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
SMIM35A0A1B0GVV1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.19■■□□□ 1.62
SMIM35A0A1B0GVV1 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SMIM35A0A1B0GVV1 C17orf82-201ENST00000623772 1530 ntBASIC25.18■■□□□ 1.62
SMIM35A0A1B0GVV1 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SMIM35A0A1B0GVV1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SMIM35A0A1B0GVV1 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
SMIM35A0A1B0GVV1 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.18■■□□□ 1.62
SMIM35A0A1B0GVV1 AC099791.2-201ENST00000605725 427 ntBASIC25.18■■□□□ 1.62
SMIM35A0A1B0GVV1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SMIM35A0A1B0GVV1 AC022211.4-201ENST00000625094 2161 ntBASIC25.18■■□□□ 1.62
SMIM35A0A1B0GVV1 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SMIM35A0A1B0GVV1 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SMIM35A0A1B0GVV1 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMIM35A0A1B0GVV1 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMIM35A0A1B0GVV1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC25.17■■□□□ 1.62
SMIM35A0A1B0GVV1 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SMIM35A0A1B0GVV1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC25.17■■□□□ 1.62
SMIM35A0A1B0GVV1 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
SMIM35A0A1B0GVV1 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SMIM35A0A1B0GVV1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC25.16■■□□□ 1.62
SMIM35A0A1B0GVV1 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC25.16■■□□□ 1.62
SMIM35A0A1B0GVV1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.16■■□□□ 1.62
SMIM35A0A1B0GVV1 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMIM35A0A1B0GVV1 CREM-210ENST00000374721 2020 ntTSL 5 BASIC25.16■■□□□ 1.62
SMIM35A0A1B0GVV1 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC25.16■■□□□ 1.62
SMIM35A0A1B0GVV1 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMIM35A0A1B0GVV1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
SMIM35A0A1B0GVV1 AP003733.4-201ENST00000623785 1697 ntBASIC25.16■■□□□ 1.62
SMIM35A0A1B0GVV1 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SMIM35A0A1B0GVV1 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMIM35A0A1B0GVV1 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SMIM35A0A1B0GVV1 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SMIM35A0A1B0GVV1 SERBP1P1-201ENST00000396021 1160 ntBASIC25.15■■□□□ 1.62
SMIM35A0A1B0GVV1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SMIM35A0A1B0GVV1 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SMIM35A0A1B0GVV1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
SMIM35A0A1B0GVV1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMIM35A0A1B0GVV1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
SMIM35A0A1B0GVV1 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMIM35A0A1B0GVV1 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMIM35A0A1B0GVV1 ZNRF2P3-201ENST00000424200 374 ntBASIC25.14■■□□□ 1.62
SMIM35A0A1B0GVV1 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SMIM35A0A1B0GVV1 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC25.14■■□□□ 1.62
SMIM35A0A1B0GVV1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC25.14■■□□□ 1.62
SMIM35A0A1B0GVV1 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC25.14■■□□□ 1.61
SMIM35A0A1B0GVV1 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SMIM35A0A1B0GVV1 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC25.13■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms