Protein–RNA interactions for Protein: A0A0K0K1D8

TRBV6-1, T-cell receptor beta variable 6-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-1A0A0K0K1D8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
TRBV6-1A0A0K0K1D8 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV6-1A0A0K0K1D8 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
TRBV6-1A0A0K0K1D8 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV6-1A0A0K0K1D8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV6-1A0A0K0K1D8 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV6-1A0A0K0K1D8 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV6-1A0A0K0K1D8 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV6-1A0A0K0K1D8 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TRBV6-1A0A0K0K1D8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV6-1A0A0K0K1D8 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV6-1A0A0K0K1D8 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBV6-1A0A0K0K1D8 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV6-1A0A0K0K1D8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV6-1A0A0K0K1D8 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
TRBV6-1A0A0K0K1D8 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBV6-1A0A0K0K1D8 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBV6-1A0A0K0K1D8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBV6-1A0A0K0K1D8 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV6-1A0A0K0K1D8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBV6-1A0A0K0K1D8 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBV6-1A0A0K0K1D8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV6-1A0A0K0K1D8 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV6-1A0A0K0K1D8 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV6-1A0A0K0K1D8 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRBV6-1A0A0K0K1D8 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRBV6-1A0A0K0K1D8 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC17.15■□□□□ 0.34
TRBV6-1A0A0K0K1D8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRBV6-1A0A0K0K1D8 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV6-1A0A0K0K1D8 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV6-1A0A0K0K1D8 AC090877.2-201ENST00000558441 1738 ntBASIC17.14■□□□□ 0.33
TRBV6-1A0A0K0K1D8 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
TRBV6-1A0A0K0K1D8 RPS2P35-201ENST00000443417 897 ntBASIC17.14■□□□□ 0.33
TRBV6-1A0A0K0K1D8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.14■□□□□ 0.33
TRBV6-1A0A0K0K1D8 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.14■□□□□ 0.33
TRBV6-1A0A0K0K1D8 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TRBV6-1A0A0K0K1D8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRBV6-1A0A0K0K1D8 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV6-1A0A0K0K1D8 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC17.14■□□□□ 0.33
TRBV6-1A0A0K0K1D8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRBV6-1A0A0K0K1D8 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV6-1A0A0K0K1D8 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRBV6-1A0A0K0K1D8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV6-1A0A0K0K1D8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TRBV6-1A0A0K0K1D8 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.13■□□□□ 0.33
TRBV6-1A0A0K0K1D8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC17.13■□□□□ 0.33
TRBV6-1A0A0K0K1D8 RAP2CP1-202ENST00000605179 643 ntBASIC17.13■□□□□ 0.33
TRBV6-1A0A0K0K1D8 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
TRBV6-1A0A0K0K1D8 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC17.13■□□□□ 0.33
TRBV6-1A0A0K0K1D8 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV6-1A0A0K0K1D8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV6-1A0A0K0K1D8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRBV6-1A0A0K0K1D8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV6-1A0A0K0K1D8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV6-1A0A0K0K1D8 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRBV6-1A0A0K0K1D8 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.12■□□□□ 0.33
TRBV6-1A0A0K0K1D8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC17.12■□□□□ 0.33
TRBV6-1A0A0K0K1D8 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-1A0A0K0K1D8 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-1A0A0K0K1D8 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-1A0A0K0K1D8 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRBV6-1A0A0K0K1D8 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-1A0A0K0K1D8 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.12■□□□□ 0.33
TRBV6-1A0A0K0K1D8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.12■□□□□ 0.33
TRBV6-1A0A0K0K1D8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-1A0A0K0K1D8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-1A0A0K0K1D8 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-1A0A0K0K1D8 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
TRBV6-1A0A0K0K1D8 AC242852.2-201ENST00000615738 1807 ntBASIC17.12■□□□□ 0.33
TRBV6-1A0A0K0K1D8 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRBV6-1A0A0K0K1D8 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
TRBV6-1A0A0K0K1D8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
TRBV6-1A0A0K0K1D8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-1A0A0K0K1D8 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-1A0A0K0K1D8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC17.11■□□□□ 0.33
TRBV6-1A0A0K0K1D8 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-1A0A0K0K1D8 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-1A0A0K0K1D8 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-1A0A0K0K1D8 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-1A0A0K0K1D8 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
TRBV6-1A0A0K0K1D8 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-1A0A0K0K1D8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-1A0A0K0K1D8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-1A0A0K0K1D8 AC026202.3-201ENST00000600805 1127 ntBASIC17.11■□□□□ 0.33
TRBV6-1A0A0K0K1D8 AC007029.1-201ENST00000604183 313 ntBASIC17.11■□□□□ 0.33
TRBV6-1A0A0K0K1D8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.11■□□□□ 0.33
TRBV6-1A0A0K0K1D8 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
TRBV6-1A0A0K0K1D8 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
TRBV6-1A0A0K0K1D8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
TRBV6-1A0A0K0K1D8 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TRBV6-1A0A0K0K1D8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms