Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
LOC102724428A0A0B4J2F2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
LOC102724428A0A0B4J2F2 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
LOC102724428A0A0B4J2F2 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
LOC102724428A0A0B4J2F2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
LOC102724428A0A0B4J2F2 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
LOC102724428A0A0B4J2F2 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC29.54■■■□□ 2.32
LOC102724428A0A0B4J2F2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
LOC102724428A0A0B4J2F2 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC29.54■■■□□ 2.32
LOC102724428A0A0B4J2F2 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC29.54■■■□□ 2.32
LOC102724428A0A0B4J2F2 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC29.54■■■□□ 2.32
LOC102724428A0A0B4J2F2 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC29.54■■■□□ 2.32
LOC102724428A0A0B4J2F2 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
LOC102724428A0A0B4J2F2 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
LOC102724428A0A0B4J2F2 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
LOC102724428A0A0B4J2F2 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC29.53■■■□□ 2.32
LOC102724428A0A0B4J2F2 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
LOC102724428A0A0B4J2F2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
LOC102724428A0A0B4J2F2 BX842568.3-201ENST00000418104 571 ntBASIC29.53■■■□□ 2.32
LOC102724428A0A0B4J2F2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
LOC102724428A0A0B4J2F2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
LOC102724428A0A0B4J2F2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC29.53■■■□□ 2.32
LOC102724428A0A0B4J2F2 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
LOC102724428A0A0B4J2F2 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC29.53■■■□□ 2.32
LOC102724428A0A0B4J2F2 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
LOC102724428A0A0B4J2F2 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
LOC102724428A0A0B4J2F2 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC29.52■■■□□ 2.32
LOC102724428A0A0B4J2F2 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC29.52■■■□□ 2.32
LOC102724428A0A0B4J2F2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC29.52■■■□□ 2.32
LOC102724428A0A0B4J2F2 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
LOC102724428A0A0B4J2F2 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
LOC102724428A0A0B4J2F2 SLC6A10P-202ENST00000431994 2058 ntBASIC29.52■■■□□ 2.32
LOC102724428A0A0B4J2F2 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
LOC102724428A0A0B4J2F2 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC29.52■■■□□ 2.32
LOC102724428A0A0B4J2F2 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
LOC102724428A0A0B4J2F2 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
LOC102724428A0A0B4J2F2 MIR3181-201ENST00000578512 73 ntBASIC29.51■■■□□ 2.31
LOC102724428A0A0B4J2F2 AL022069.1-201ENST00000568025 1636 ntBASIC29.51■■■□□ 2.31
LOC102724428A0A0B4J2F2 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
LOC102724428A0A0B4J2F2 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC29.51■■■□□ 2.31
LOC102724428A0A0B4J2F2 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC29.5■■■□□ 2.31
LOC102724428A0A0B4J2F2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
LOC102724428A0A0B4J2F2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC29.5■■■□□ 2.31
LOC102724428A0A0B4J2F2 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC29.5■■■□□ 2.31
LOC102724428A0A0B4J2F2 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC29.5■■■□□ 2.31
LOC102724428A0A0B4J2F2 AK1-201ENST00000223836 736 ntTSL 3 BASIC29.49■■■□□ 2.31
LOC102724428A0A0B4J2F2 GRAMD4P2-201ENST00000423297 1097 ntBASIC29.49■■■□□ 2.31
LOC102724428A0A0B4J2F2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC29.49■■■□□ 2.31
LOC102724428A0A0B4J2F2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC29.49■■■□□ 2.31
LOC102724428A0A0B4J2F2 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC29.49■■■□□ 2.31
LOC102724428A0A0B4J2F2 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC29.49■■■□□ 2.31
LOC102724428A0A0B4J2F2 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC29.49■■■□□ 2.31
LOC102724428A0A0B4J2F2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
LOC102724428A0A0B4J2F2 AC092803.2-201ENST00000564287 1899 ntBASIC29.48■■■□□ 2.31
LOC102724428A0A0B4J2F2 AC009086.3-201ENST00000623486 1008 ntBASIC29.48■■■□□ 2.31
LOC102724428A0A0B4J2F2 RARRES2P11-201ENST00000635158 484 ntBASIC29.48■■■□□ 2.31
LOC102724428A0A0B4J2F2 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
LOC102724428A0A0B4J2F2 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
LOC102724428A0A0B4J2F2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC29.47■■■□□ 2.31
LOC102724428A0A0B4J2F2 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
LOC102724428A0A0B4J2F2 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
LOC102724428A0A0B4J2F2 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
LOC102724428A0A0B4J2F2 AC090192.1-201ENST00000517740 490 ntBASIC29.47■■■□□ 2.31
LOC102724428A0A0B4J2F2 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC29.47■■■□□ 2.31
LOC102724428A0A0B4J2F2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC29.47■■■□□ 2.31
LOC102724428A0A0B4J2F2 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC29.46■■■□□ 2.31
LOC102724428A0A0B4J2F2 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
LOC102724428A0A0B4J2F2 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC29.46■■■□□ 2.31
LOC102724428A0A0B4J2F2 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
LOC102724428A0A0B4J2F2 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
LOC102724428A0A0B4J2F2 SNX3-202ENST00000349379 890 ntTSL 2 BASIC29.46■■■□□ 2.31
LOC102724428A0A0B4J2F2 ASB1-202ENST00000409297 878 ntTSL 5 BASIC29.46■■■□□ 2.31
LOC102724428A0A0B4J2F2 AC034268.1-201ENST00000441047 882 ntBASIC29.46■■■□□ 2.31
LOC102724428A0A0B4J2F2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC29.46■■■□□ 2.31
LOC102724428A0A0B4J2F2 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC29.46■■■□□ 2.31
LOC102724428A0A0B4J2F2 IKBKGP1-201ENST00000612193 1073 ntBASIC29.46■■■□□ 2.31
LOC102724428A0A0B4J2F2 MIR6089-201ENST00000616698 64 ntBASIC29.46■■■□□ 2.31
LOC102724428A0A0B4J2F2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
LOC102724428A0A0B4J2F2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC29.45■■■□□ 2.31
LOC102724428A0A0B4J2F2 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC29.45■■■□□ 2.31
LOC102724428A0A0B4J2F2 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC29.45■■■□□ 2.31
LOC102724428A0A0B4J2F2 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
LOC102724428A0A0B4J2F2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
LOC102724428A0A0B4J2F2 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC29.45■■■□□ 2.3
LOC102724428A0A0B4J2F2 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC29.44■■■□□ 2.3
LOC102724428A0A0B4J2F2 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC29.44■■■□□ 2.3
LOC102724428A0A0B4J2F2 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
LOC102724428A0A0B4J2F2 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC29.44■■■□□ 2.3
LOC102724428A0A0B4J2F2 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
LOC102724428A0A0B4J2F2 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC29.44■■■□□ 2.3
LOC102724428A0A0B4J2F2 AC022517.1-201ENST00000592429 346 ntBASIC29.44■■■□□ 2.3
LOC102724428A0A0B4J2F2 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC29.44■■■□□ 2.3
LOC102724428A0A0B4J2F2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC29.44■■■□□ 2.3
LOC102724428A0A0B4J2F2 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
LOC102724428A0A0B4J2F2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC29.44■■■□□ 2.3
LOC102724428A0A0B4J2F2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC29.43■■■□□ 2.3
LOC102724428A0A0B4J2F2 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
LOC102724428A0A0B4J2F2 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
LOC102724428A0A0B4J2F2 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
LOC102724428A0A0B4J2F2 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC29.43■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms