Protein–RNA interactions for Protein: A0A0B4J263

TRAV39, T-cell receptor alpha variable 39 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39A0A0B4J263 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.13■□□□□ 0.65
TRAV39A0A0B4J263 AC019171.1-201ENST00000601251 1056 ntBASIC19.13■□□□□ 0.65
TRAV39A0A0B4J263 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
TRAV39A0A0B4J263 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRAV39A0A0B4J263 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV39A0A0B4J263 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV39A0A0B4J263 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAV39A0A0B4J263 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.13■□□□□ 0.65
TRAV39A0A0B4J263 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV39A0A0B4J263 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV39A0A0B4J263 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV39A0A0B4J263 C9orf163-202ENST00000624034 2573 ntBASIC19.13■□□□□ 0.65
TRAV39A0A0B4J263 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV39A0A0B4J263 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAV39A0A0B4J263 IDNK-201ENST00000376417 511 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAV39A0A0B4J263 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV39A0A0B4J263 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV39A0A0B4J263 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.12■□□□□ 0.65
TRAV39A0A0B4J263 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAV39A0A0B4J263 AC012354.3-201ENST00000623734 483 ntBASIC19.12■□□□□ 0.65
TRAV39A0A0B4J263 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV39A0A0B4J263 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV39A0A0B4J263 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
TRAV39A0A0B4J263 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV39A0A0B4J263 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV39A0A0B4J263 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV39A0A0B4J263 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV39A0A0B4J263 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV39A0A0B4J263 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TRAV39A0A0B4J263 AC120024.1-201ENST00000562672 995 ntBASIC19.11■□□□□ 0.65
TRAV39A0A0B4J263 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV39A0A0B4J263 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV39A0A0B4J263 GAK-223ENST00000628912 497 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV39A0A0B4J263 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV39A0A0B4J263 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV39A0A0B4J263 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV39A0A0B4J263 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
TRAV39A0A0B4J263 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV39A0A0B4J263 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV39A0A0B4J263 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV39A0A0B4J263 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV39A0A0B4J263 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV39A0A0B4J263 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TRAV39A0A0B4J263 ME2-208ENST00000638937 2471 ntTSL 5 BASIC19.1■□□□□ 0.65
TRAV39A0A0B4J263 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV39A0A0B4J263 AC011551.1-201ENST00000614101 683 ntBASIC19.09■□□□□ 0.65
TRAV39A0A0B4J263 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV39A0A0B4J263 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV39A0A0B4J263 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC19.09■□□□□ 0.65
TRAV39A0A0B4J263 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAV39A0A0B4J263 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAV39A0A0B4J263 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.08■□□□□ 0.65
TRAV39A0A0B4J263 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.08■□□□□ 0.64
TRAV39A0A0B4J263 DUSP8P5-201ENST00000422884 1815 ntBASIC19.08■□□□□ 0.64
TRAV39A0A0B4J263 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV39A0A0B4J263 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV39A0A0B4J263 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAV39A0A0B4J263 KRT8P33-201ENST00000508125 1423 ntBASIC19.08■□□□□ 0.64
TRAV39A0A0B4J263 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TRAV39A0A0B4J263 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV39A0A0B4J263 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV39A0A0B4J263 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TRAV39A0A0B4J263 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV39A0A0B4J263 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV39A0A0B4J263 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV39A0A0B4J263 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV39A0A0B4J263 AC022616.5-201ENST00000518796 181 ntBASIC19.07■□□□□ 0.64
TRAV39A0A0B4J263 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC19.07■□□□□ 0.64
TRAV39A0A0B4J263 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV39A0A0B4J263 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
TRAV39A0A0B4J263 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV39A0A0B4J263 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV39A0A0B4J263 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.07■□□□□ 0.64
TRAV39A0A0B4J263 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRAV39A0A0B4J263 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV39A0A0B4J263 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV39A0A0B4J263 AC131274.2-201ENST00000580697 1507 ntBASIC19.06■□□□□ 0.64
TRAV39A0A0B4J263 EI24-213ENST00000618552 1747 ntTSL 5 BASIC19.06■□□□□ 0.64
TRAV39A0A0B4J263 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV39A0A0B4J263 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV39A0A0B4J263 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV39A0A0B4J263 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV39A0A0B4J263 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV39A0A0B4J263 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV39A0A0B4J263 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TRAV39A0A0B4J263 AC074183.2-201ENST00000623112 922 ntBASIC19.06■□□□□ 0.64
TRAV39A0A0B4J263 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.06■□□□□ 0.64
TRAV39A0A0B4J263 AL022069.1-201ENST00000568025 1636 ntBASIC19.06■□□□□ 0.64
TRAV39A0A0B4J263 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV39A0A0B4J263 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV39A0A0B4J263 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV39A0A0B4J263 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.06■□□□□ 0.64
TRAV39A0A0B4J263 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TRAV39A0A0B4J263 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
TRAV39A0A0B4J263 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV39A0A0B4J263 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV39A0A0B4J263 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV39A0A0B4J263 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRAV39A0A0B4J263 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC19.05■□□□□ 0.64
TRAV39A0A0B4J263 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms