Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-6A0A0B4J262 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-6A0A0B4J262 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC16.68■□□□□ 0.26
TRAV8-6A0A0B4J262 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-6A0A0B4J262 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-6A0A0B4J262 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-6A0A0B4J262 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-6A0A0B4J262 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC16.68■□□□□ 0.26
TRAV8-6A0A0B4J262 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC16.68■□□□□ 0.26
TRAV8-6A0A0B4J262 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRAV8-6A0A0B4J262 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 AC096887.2-201ENST00000623443 1957 ntBASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 TYMP-203ENST00000395680 1608 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 TYMP-204ENST00000395681 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRAV8-6A0A0B4J262 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV8-6A0A0B4J262 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-6A0A0B4J262 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-6A0A0B4J262 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-6A0A0B4J262 EED-207ENST00000528180 1745 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV8-6A0A0B4J262 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC16.66■□□□□ 0.26
TRAV8-6A0A0B4J262 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV8-6A0A0B4J262 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV8-6A0A0B4J262 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV8-6A0A0B4J262 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-6A0A0B4J262 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC16.66■□□□□ 0.26
TRAV8-6A0A0B4J262 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRAV8-6A0A0B4J262 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC16.66■□□□□ 0.26
TRAV8-6A0A0B4J262 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-6A0A0B4J262 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRAV8-6A0A0B4J262 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV8-6A0A0B4J262 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-6A0A0B4J262 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-6A0A0B4J262 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-6A0A0B4J262 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-6A0A0B4J262 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV8-6A0A0B4J262 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-6A0A0B4J262 AC093536.1-201ENST00000569153 554 ntBASIC16.65■□□□□ 0.26
TRAV8-6A0A0B4J262 GFER-205ENST00000569451 517 ntTSL 5 BASIC16.65■□□□□ 0.26
TRAV8-6A0A0B4J262 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRAV8-6A0A0B4J262 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRAV8-6A0A0B4J262 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC16.65■□□□□ 0.26
TRAV8-6A0A0B4J262 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-6A0A0B4J262 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-6A0A0B4J262 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-6A0A0B4J262 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-6A0A0B4J262 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRAV8-6A0A0B4J262 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TRAV8-6A0A0B4J262 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
TRAV8-6A0A0B4J262 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-6A0A0B4J262 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-6A0A0B4J262 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-6A0A0B4J262 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-6A0A0B4J262 RARRES2P2-201ENST00000394842 485 ntBASIC16.64■□□□□ 0.25
TRAV8-6A0A0B4J262 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
TRAV8-6A0A0B4J262 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRAV8-6A0A0B4J262 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-6A0A0B4J262 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-6A0A0B4J262 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-6A0A0B4J262 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRAV8-6A0A0B4J262 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-6A0A0B4J262 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
TRAV8-6A0A0B4J262 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-6A0A0B4J262 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
TRAV8-6A0A0B4J262 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-6A0A0B4J262 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
TRAV8-6A0A0B4J262 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-6A0A0B4J262 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
TRAV8-6A0A0B4J262 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC16.63■□□□□ 0.25
TRAV8-6A0A0B4J262 HES4-204ENST00000484667 667 ntTSL 3 BASIC16.63■□□□□ 0.25
TRAV8-6A0A0B4J262 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRAV8-6A0A0B4J262 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC16.63■□□□□ 0.25
TRAV8-6A0A0B4J262 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
TRAV8-6A0A0B4J262 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRAV8-6A0A0B4J262 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRAV8-6A0A0B4J262 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
TRAV8-6A0A0B4J262 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
TRAV8-6A0A0B4J262 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-6A0A0B4J262 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-6A0A0B4J262 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRAV8-6A0A0B4J262 AC007375.3-201ENST00000600936 2314 ntBASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms