Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
TRAV1-2A0A0B4J238 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.94■□□□□ 0.78
TRAV1-2A0A0B4J238 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
TRAV1-2A0A0B4J238 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV1-2A0A0B4J238 MIR3648-2-201ENST00000581792 180 ntBASIC19.94■□□□□ 0.78
TRAV1-2A0A0B4J238 MIR3648-1-201ENST00000615959 180 ntBASIC19.94■□□□□ 0.78
TRAV1-2A0A0B4J238 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.94■□□□□ 0.78
TRAV1-2A0A0B4J238 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV1-2A0A0B4J238 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV1-2A0A0B4J238 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
TRAV1-2A0A0B4J238 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
TRAV1-2A0A0B4J238 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV1-2A0A0B4J238 AC093536.1-201ENST00000569153 554 ntBASIC19.93■□□□□ 0.78
TRAV1-2A0A0B4J238 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.93■□□□□ 0.78
TRAV1-2A0A0B4J238 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC19.93■□□□□ 0.78
TRAV1-2A0A0B4J238 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV1-2A0A0B4J238 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
TRAV1-2A0A0B4J238 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
TRAV1-2A0A0B4J238 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.93■□□□□ 0.78
TRAV1-2A0A0B4J238 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV1-2A0A0B4J238 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV1-2A0A0B4J238 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV1-2A0A0B4J238 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV1-2A0A0B4J238 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.92■□□□□ 0.78
TRAV1-2A0A0B4J238 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.92■□□□□ 0.78
TRAV1-2A0A0B4J238 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
TRAV1-2A0A0B4J238 RPS2P35-201ENST00000443417 897 ntBASIC19.92■□□□□ 0.78
TRAV1-2A0A0B4J238 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC19.92■□□□□ 0.78
TRAV1-2A0A0B4J238 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV1-2A0A0B4J238 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
TRAV1-2A0A0B4J238 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC19.92■□□□□ 0.78
TRAV1-2A0A0B4J238 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV1-2A0A0B4J238 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV1-2A0A0B4J238 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC19.91■□□□□ 0.78
TRAV1-2A0A0B4J238 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV1-2A0A0B4J238 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.91■□□□□ 0.78
TRAV1-2A0A0B4J238 ECEL1P2-201ENST00000461596 1295 ntBASIC19.91■□□□□ 0.78
TRAV1-2A0A0B4J238 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV1-2A0A0B4J238 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV1-2A0A0B4J238 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV1-2A0A0B4J238 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC19.91■□□□□ 0.78
TRAV1-2A0A0B4J238 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.91■□□□□ 0.78
TRAV1-2A0A0B4J238 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.91■□□□□ 0.78
TRAV1-2A0A0B4J238 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
TRAV1-2A0A0B4J238 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TRAV1-2A0A0B4J238 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
TRAV1-2A0A0B4J238 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV1-2A0A0B4J238 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV1-2A0A0B4J238 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV1-2A0A0B4J238 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV1-2A0A0B4J238 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV1-2A0A0B4J238 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV1-2A0A0B4J238 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC19.9■□□□□ 0.78
TRAV1-2A0A0B4J238 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAV1-2A0A0B4J238 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV1-2A0A0B4J238 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV1-2A0A0B4J238 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV1-2A0A0B4J238 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAV1-2A0A0B4J238 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV1-2A0A0B4J238 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV1-2A0A0B4J238 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
TRAV1-2A0A0B4J238 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC19.9■□□□□ 0.78
TRAV1-2A0A0B4J238 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV1-2A0A0B4J238 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
TRAV1-2A0A0B4J238 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
TRAV1-2A0A0B4J238 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV1-2A0A0B4J238 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV1-2A0A0B4J238 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV1-2A0A0B4J238 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV1-2A0A0B4J238 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV1-2A0A0B4J238 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.89■□□□□ 0.77
TRAV1-2A0A0B4J238 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV1-2A0A0B4J238 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV1-2A0A0B4J238 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
TRAV1-2A0A0B4J238 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC19.89■□□□□ 0.77
TRAV1-2A0A0B4J238 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC19.89■□□□□ 0.77
TRAV1-2A0A0B4J238 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV1-2A0A0B4J238 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV1-2A0A0B4J238 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV1-2A0A0B4J238 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAV1-2A0A0B4J238 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV1-2A0A0B4J238 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
TRAV1-2A0A0B4J238 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
TRAV1-2A0A0B4J238 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV1-2A0A0B4J238 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.88■□□□□ 0.77
TRAV1-2A0A0B4J238 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV1-2A0A0B4J238 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV1-2A0A0B4J238 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC19.88■□□□□ 0.77
TRAV1-2A0A0B4J238 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
TRAV1-2A0A0B4J238 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TRAV1-2A0A0B4J238 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
TRAV1-2A0A0B4J238 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.87■□□□□ 0.77
TRAV1-2A0A0B4J238 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
TRAV1-2A0A0B4J238 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV1-2A0A0B4J238 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV1-2A0A0B4J238 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV1-2A0A0B4J238 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV1-2A0A0B4J238 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.86■□□□□ 0.77
TRAV1-2A0A0B4J238 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
TRAV1-2A0A0B4J238 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms