Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 AC093004.1-201ENST00000508850 424 ntBASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 SERBP1P5-201ENST00000510079 1181 ntBASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 RRP7BP-205ENST00000566851 833 ntBASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 AC009118.2-201ENST00000613275 655 ntBASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 MIR8072-201ENST00000614241 80 ntBASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 AL157414.3-201ENST00000624276 1954 ntBASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
RHBDD3Q9Y3P4 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 AL031595.1-201ENST00000623969 4709 ntBASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 SLC7A15P-201ENST00000424028 1363 ntBASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 SPTLC1P1-201ENST00000447199 261 ntBASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 AC055876.2-201ENST00000531834 546 ntBASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.13□□□□□ -0.31
RHBDD3Q9Y3P4 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
RHBDD3Q9Y3P4 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms