Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
POLR1DQ9Y2S0 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
POLR1DQ9Y2S0 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.43□□□□□ -0.26
POLR1DQ9Y2S0 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.43□□□□□ -0.26
POLR1DQ9Y2S0 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
POLR1DQ9Y2S0 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
POLR1DQ9Y2S0 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.43□□□□□ -0.26
POLR1DQ9Y2S0 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
POLR1DQ9Y2S0 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.43□□□□□ -0.26
POLR1DQ9Y2S0 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.43□□□□□ -0.26
POLR1DQ9Y2S0 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
POLR1DQ9Y2S0 TP73-203ENST00000357733 4899 ntTSL 5 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 C1QBPP1-201ENST00000400117 770 ntBASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 AC026410.3-201ENST00000514280 936 ntBASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 AC004790.1-201ENST00000612686 536 ntBASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 UNC13B-206ENST00000617908 6432 ntTSL 5 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 UNC13B-207ENST00000619578 6426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 NFATC2-201ENST00000371564 7525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 MTHFR-210ENST00000641407 2387 ntBASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
POLR1DQ9Y2S0 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 MIR770-201ENST00000390219 98 ntBASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 AL645937.2-201ENST00000396808 931 ntBASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 SOCS2P1-201ENST00000417727 557 ntBASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 NUS1P3-201ENST00000423502 862 ntBASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 GAPDHP40-201ENST00000505218 1006 ntBASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.41□□□□□ -0.26
POLR1DQ9Y2S0 AP001582.1-201ENST00000525856 295 ntBASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms