Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.72□□□□□ -0.21
LRFN1Q9P244 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRFN1Q9P244 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRFN1Q9P244 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRFN1Q9P244 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRFN1Q9P244 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRFN1Q9P244 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.71□□□□□ -0.21
LRFN1Q9P244 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
LRFN1Q9P244 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
LRFN1Q9P244 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRFN1Q9P244 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.71□□□□□ -0.21
LRFN1Q9P244 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRFN1Q9P244 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.71□□□□□ -0.21
LRFN1Q9P244 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRFN1Q9P244 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRFN1Q9P244 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
LRFN1Q9P244 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.71□□□□□ -0.21
LRFN1Q9P244 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRFN1Q9P244 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LRFN1Q9P244 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
LRFN1Q9P244 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRFN1Q9P244 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRFN1Q9P244 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
LRFN1Q9P244 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRFN1Q9P244 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRFN1Q9P244 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.71□□□□□ -0.21
LRFN1Q9P244 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.71□□□□□ -0.21
LRFN1Q9P244 CALR4P-201ENST00000431943 946 ntBASIC13.71□□□□□ -0.21
LRFN1Q9P244 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.71□□□□□ -0.21
LRFN1Q9P244 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.71□□□□□ -0.21
LRFN1Q9P244 SCARNA20.5-201ENST00000516991 142 ntBASIC13.71□□□□□ -0.21
LRFN1Q9P244 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC13.71□□□□□ -0.21
LRFN1Q9P244 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC13.71□□□□□ -0.21
LRFN1Q9P244 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC13.71□□□□□ -0.21
LRFN1Q9P244 AL358472.3-201ENST00000608147 415 ntBASIC13.71□□□□□ -0.21
LRFN1Q9P244 AL023803.2-201ENST00000620080 638 ntBASIC13.71□□□□□ -0.21
LRFN1Q9P244 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRFN1Q9P244 AC138028.6-201ENST00000616106 1482 ntBASIC13.71□□□□□ -0.21
LRFN1Q9P244 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
LRFN1Q9P244 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.71□□□□□ -0.21
LRFN1Q9P244 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRFN1Q9P244 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
LRFN1Q9P244 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC13.71□□□□□ -0.21
LRFN1Q9P244 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
LRFN1Q9P244 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
LRFN1Q9P244 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRFN1Q9P244 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
LRFN1Q9P244 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRFN1Q9P244 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.71□□□□□ -0.22
LRFN1Q9P244 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.22
LRFN1Q9P244 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRFN1Q9P244 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
LRFN1Q9P244 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRFN1Q9P244 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
LRFN1Q9P244 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
LRFN1Q9P244 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC13.71□□□□□ -0.22
LRFN1Q9P244 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRFN1Q9P244 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.7□□□□□ -0.22
LRFN1Q9P244 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRFN1Q9P244 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
LRFN1Q9P244 AC009093.2-202ENST00000620513 2079 ntBASIC13.7□□□□□ -0.22
LRFN1Q9P244 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.7□□□□□ -0.22
LRFN1Q9P244 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRFN1Q9P244 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRFN1Q9P244 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRFN1Q9P244 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRFN1Q9P244 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRFN1Q9P244 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LRFN1Q9P244 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRFN1Q9P244 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
LRFN1Q9P244 FNTAP2-201ENST00000430308 634 ntBASIC13.7□□□□□ -0.22
LRFN1Q9P244 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC13.7□□□□□ -0.22
LRFN1Q9P244 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.7□□□□□ -0.22
LRFN1Q9P244 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.7□□□□□ -0.22
LRFN1Q9P244 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC13.7□□□□□ -0.22
LRFN1Q9P244 SERPINA13P-202ENST00000478994 924 ntBASIC13.7□□□□□ -0.22
LRFN1Q9P244 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC13.7□□□□□ -0.22
LRFN1Q9P244 AC005730.2-201ENST00000564549 1184 ntBASIC13.7□□□□□ -0.22
LRFN1Q9P244 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC13.7□□□□□ -0.22
LRFN1Q9P244 AL451050.2-201ENST00000606967 682 ntBASIC13.7□□□□□ -0.22
LRFN1Q9P244 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC13.7□□□□□ -0.22
LRFN1Q9P244 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.7□□□□□ -0.22
LRFN1Q9P244 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.7□□□□□ -0.22
LRFN1Q9P244 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LRFN1Q9P244 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LRFN1Q9P244 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRFN1Q9P244 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRFN1Q9P244 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRFN1Q9P244 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
LRFN1Q9P244 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRFN1Q9P244 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
LRFN1Q9P244 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC13.7□□□□□ -0.22
LRFN1Q9P244 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LRFN1Q9P244 KRT8P29-201ENST00000420409 1371 ntBASIC13.7□□□□□ -0.22
LRFN1Q9P244 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
LRFN1Q9P244 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LRFN1Q9P244 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LRFN1Q9P244 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms