Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 AC018442.1-201ENST00000421439 2061 ntBASIC14.25□□□□□ -0.13
CCDC88CQ9P219 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 MPV17-205ENST00000402310 906 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 AC114812.1-204ENST00000449669 728 ntBASIC14.24□□□□□ -0.13
CCDC88CQ9P219 FAM86HP-204ENST00000513466 959 ntBASIC14.24□□□□□ -0.13
CCDC88CQ9P219 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 AC009486.1-201ENST00000569860 813 ntBASIC14.24□□□□□ -0.13
CCDC88CQ9P219 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 AC008687.7-202ENST00000637404 953 ntBASIC14.24□□□□□ -0.13
CCDC88CQ9P219 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 AC097724.1-201ENST00000609581 426 ntBASIC14.24□□□□□ -0.13
CCDC88CQ9P219 AC244093.1-201ENST00000610837 814 ntBASIC14.24□□□□□ -0.13
CCDC88CQ9P219 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
CCDC88CQ9P219 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 NUS1P3-201ENST00000423502 862 ntBASIC14.23□□□□□ -0.13
CCDC88CQ9P219 FAM197Y7-201ENST00000432892 766 ntBASIC14.23□□□□□ -0.13
CCDC88CQ9P219 NKAIN1P1-201ENST00000435754 582 ntBASIC14.23□□□□□ -0.13
CCDC88CQ9P219 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CCDC88CQ9P219 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms