Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSU72Q9NP77 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSU72Q9NP77 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSU72Q9NP77 AC015688.4-201ENST00000580780 1647 ntBASIC14.8□□□□□ -0.04
SSU72Q9NP77 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SSU72Q9NP77 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.8□□□□□ -0.04
SSU72Q9NP77 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC14.8□□□□□ -0.04
SSU72Q9NP77 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SSU72Q9NP77 NUTM2HP-201ENST00000442076 2498 ntBASIC14.8□□□□□ -0.04
SSU72Q9NP77 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SSU72Q9NP77 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SSU72Q9NP77 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SSU72Q9NP77 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSU72Q9NP77 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSU72Q9NP77 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSU72Q9NP77 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSU72Q9NP77 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SSU72Q9NP77 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSU72Q9NP77 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSU72Q9NP77 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSU72Q9NP77 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSU72Q9NP77 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SSU72Q9NP77 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSU72Q9NP77 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SSU72Q9NP77 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSU72Q9NP77 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSU72Q9NP77 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.79□□□□□ -0.04
SSU72Q9NP77 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.79□□□□□ -0.04
SSU72Q9NP77 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC14.79□□□□□ -0.04
SSU72Q9NP77 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SSU72Q9NP77 AC022616.1-201ENST00000518688 554 ntBASIC14.79□□□□□ -0.04
SSU72Q9NP77 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SSU72Q9NP77 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
SSU72Q9NP77 AC079416.2-201ENST00000625035 1193 ntBASIC14.79□□□□□ -0.04
SSU72Q9NP77 AL365209.1-201ENST00000624418 6473 ntBASIC14.79□□□□□ -0.04
SSU72Q9NP77 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
SSU72Q9NP77 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSU72Q9NP77 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SSU72Q9NP77 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SSU72Q9NP77 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SSU72Q9NP77 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSU72Q9NP77 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSU72Q9NP77 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSU72Q9NP77 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSU72Q9NP77 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSU72Q9NP77 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSU72Q9NP77 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSU72Q9NP77 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSU72Q9NP77 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSU72Q9NP77 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 MIR940-201ENST00000401276 94 ntBASIC14.78□□□□□ -0.04
SSU72Q9NP77 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 DNAJB3-201ENST00000446806 729 ntBASIC14.78□□□□□ -0.04
SSU72Q9NP77 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSU72Q9NP77 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSU72Q9NP77 AGAP10P-201ENST00000454844 2418 ntBASIC14.78□□□□□ -0.04
SSU72Q9NP77 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSU72Q9NP77 AC072061.1-201ENST00000569710 2234 ntBASIC14.78□□□□□ -0.04
SSU72Q9NP77 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSU72Q9NP77 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSU72Q9NP77 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSU72Q9NP77 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSU72Q9NP77 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSU72Q9NP77 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSU72Q9NP77 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSU72Q9NP77 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSU72Q9NP77 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SSU72Q9NP77 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
SSU72Q9NP77 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SSU72Q9NP77 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SSU72Q9NP77 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSU72Q9NP77 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSU72Q9NP77 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SSU72Q9NP77 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SSU72Q9NP77 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
SSU72Q9NP77 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SSU72Q9NP77 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 143.1 ms