Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC13.48□□□□□ -0.25
CHD8Q9HCK8 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 TBC1D3P2-201ENST00000339120 1513 ntTSL 2 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 SHMT1P1-201ENST00000419974 1312 ntBASIC13.47□□□□□ -0.25
CHD8Q9HCK8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 BRD7P5-201ENST00000299197 1822 ntBASIC13.47□□□□□ -0.25
CHD8Q9HCK8 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 HNRNPA1P21-201ENST00000424115 961 ntBASIC13.47□□□□□ -0.25
CHD8Q9HCK8 VSTM1-205ENST00000425006 608 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 AC004801.1-201ENST00000549557 360 ntBASIC13.47□□□□□ -0.25
CHD8Q9HCK8 AC087741.1-204ENST00000573935 646 ntTSL 3 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 AC019109.1-201ENST00000401725 1874 ntBASIC13.47□□□□□ -0.25
CHD8Q9HCK8 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 PLEKHG6-202ENST00000304581 1424 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 ASS1P1-201ENST00000402854 1237 ntBASIC13.47□□□□□ -0.25
CHD8Q9HCK8 CICP13-201ENST00000422015 2789 ntBASIC13.47□□□□□ -0.25
CHD8Q9HCK8 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 AC009517.1-201ENST00000454750 570 ntBASIC13.47□□□□□ -0.25
CHD8Q9HCK8 RNF7-205ENST00000480908 782 ntTSL 4 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 RN7SL87P-201ENST00000497657 288 ntBASIC13.47□□□□□ -0.25
CHD8Q9HCK8 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 KRT8P2-201ENST00000556193 944 ntBASIC13.47□□□□□ -0.25
CHD8Q9HCK8 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 NAP1L1-226ENST00000552342 1526 ntTSL 5 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CHD8Q9HCK8 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 IGLV3-9-201ENST00000390316 461 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 PPP1R2P10-201ENST00000393023 595 ntBASIC13.46□□□□□ -0.25
CHD8Q9HCK8 AC000077.1-201ENST00000420012 953 ntBASIC13.46□□□□□ -0.25
CHD8Q9HCK8 RPL18AP16-201ENST00000424057 531 ntBASIC13.46□□□□□ -0.25
CHD8Q9HCK8 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 TMEM154-202ENST00000504064 878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 MIR4459-201ENST00000581837 66 ntBASIC13.46□□□□□ -0.25
CHD8Q9HCK8 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 ESR1-214ENST00000638569 132 ntTSL 5 BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.46□□□□□ -0.25
CHD8Q9HCK8 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CHD8Q9HCK8 PDCD6-201ENST00000264933 1135 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
CHD8Q9HCK8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms