Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 RPL7P35-201ENST00000446943 740 ntBASIC17.39■□□□□ 0.37
EFCC1Q9HA90 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 GMFG-209ENST00000600322 622 ntTSL 5 BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 AC103810.10-201ENST00000606504 343 ntBASIC17.39■□□□□ 0.37
EFCC1Q9HA90 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.39■□□□□ 0.37
EFCC1Q9HA90 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
EFCC1Q9HA90 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 REXO1L5P-201ENST00000622260 2098 ntBASIC17.38■□□□□ 0.37
EFCC1Q9HA90 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 HLA-K-203ENST00000430151 1046 ntBASIC17.38■□□□□ 0.37
EFCC1Q9HA90 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 MIR4754-201ENST00000582477 89 ntBASIC17.38■□□□□ 0.37
EFCC1Q9HA90 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 AC051619.9-201ENST00000623237 597 ntBASIC17.38■□□□□ 0.37
EFCC1Q9HA90 AL162426.1-201ENST00000624141 743 ntBASIC17.38■□□□□ 0.37
EFCC1Q9HA90 AL645728.2-202ENST00000641679 227 ntBASIC17.38■□□□□ 0.37
EFCC1Q9HA90 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 AC022532.1-201ENST00000624563 1728 ntBASIC17.38■□□□□ 0.37
EFCC1Q9HA90 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.38■□□□□ 0.37
EFCC1Q9HA90 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
EFCC1Q9HA90 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 FLJ16779-201ENST00000612722 7638 ntBASIC17.37■□□□□ 0.37
EFCC1Q9HA90 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 HPGD-203ENST00000422112 805 ntTSL 2 BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 PPOX-204ENST00000462866 473 ntTSL 5 BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 AC093330.1-206ENST00000582546 812 ntTSL 3 BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 AC063926.3-201ENST00000624734 5658 ntBASIC17.37■□□□□ 0.37
EFCC1Q9HA90 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 AC005252.3-201ENST00000623855 2258 ntBASIC17.37■□□□□ 0.37
EFCC1Q9HA90 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
EFCC1Q9HA90 AC023908.3-201ENST00000564211 3047 ntBASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 126.8 ms