Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 OR7E125P-201ENST00000443450 846 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 LINC01738-201ENST00000454285 815 ntTSL 3 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 Y_RNA.631-201ENST00000459607 101 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 AC090543.1-201ENST00000492168 485 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 AC096661.1-201ENST00000515870 822 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 RN7SKP116-201ENST00000516902 319 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 Y_RNA.711-201ENST00000516993 102 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 SMIM18-201ENST00000517349 905 ntAPPRIS P1 TSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 GMDS-AS1-213ENST00000534441 738 ntTSL 3 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 LINC01405-203ENST00000548368 705 ntTSL 3 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 AC011611.1-201ENST00000552179 197 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 AC023905.1-203ENST00000560180 765 ntTSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 GALNS-213ENST00000569433 723 ntTSL 3 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 MTCO1P40-201ENST00000574371 625 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 AC010487.1-201ENST00000594408 1172 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 NPAP1P7-201ENST00000613027 823 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 AC090617.10-201ENST00000624308 134 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 MIR3662-201ENST00000637030 95 ntBASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 ZCRB1-201ENST00000266529 1827 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 MAP3K7CL-201ENST00000286791 1725 ntTSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 PCLO-209ENST00000618073 1614 ntTSL 5 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC9.67□□□□□ -0.86
KRTAP3-3Q9BYR6 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 PDIA3P1-201ENST00000471856 1510 ntBASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 RFPL2-201ENST00000248980 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 RFPL2-202ENST00000248983 1474 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 HSD11B1-203ENST00000367028 1461 ntAPPRIS P1 TSL 5 BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 SSBP2-219ENST00000515395 1398 ntTSL 2 BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 RPL27-201ENST00000253788 490 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 OR56B2P-201ENST00000317102 954 ntBASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 TREM1-202ENST00000334475 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 B4GALT6-203ENST00000383131 1239 ntTSL 1 (best) BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 RNU6-767P-201ENST00000384132 107 ntBASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 RNU6-474P-201ENST00000384243 107 ntBASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 RFKP1-201ENST00000400940 428 ntBASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 RPL36A-HNRNPH2-202ENST00000409338 572 ntTSL 4 BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 HLA-DQB2-229ENST00000411527 1059 ntBASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 AL035250.1-201ENST00000424662 593 ntTSL 2 BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 RPL5P34-201ENST00000426545 891 ntBASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 ARL5AP2-201ENST00000444698 533 ntBASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC9.66□□□□□ -0.86
KRTAP3-3Q9BYR6 AL357037.1-201ENST00000454758 322 ntBASIC9.66□□□□□ -0.86
Retrieved 100 of 98,524 protein–RNA pairs in 143.8 ms