Protein–RNA interactions for Protein: Q9BX26

SYCP2, Synaptonemal complex protein 2, humanhuman

Predictions only

Length 1,530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP2Q9BX26 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC21.72■■□□□ 1.07
SYCP2Q9BX26 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC21.72■■□□□ 1.07
SYCP2Q9BX26 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYCP2Q9BX26 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYCP2Q9BX26 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYCP2Q9BX26 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 CTBP2P8-201ENST00000422584 1330 ntBASIC21.71■■□□□ 1.07
SYCP2Q9BX26 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 AL161932.2-201ENST00000435436 679 ntBASIC21.71■■□□□ 1.07
SYCP2Q9BX26 RPL35P9-201ENST00000446059 350 ntBASIC21.71■■□□□ 1.07
SYCP2Q9BX26 RNA5SP406-201ENST00000516106 112 ntBASIC21.71■■□□□ 1.07
SYCP2Q9BX26 AC226150.1-201ENST00000544259 466 ntBASIC21.71■■□□□ 1.07
SYCP2Q9BX26 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 TRMT112P3-201ENST00000580149 358 ntBASIC21.71■■□□□ 1.07
SYCP2Q9BX26 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 ETV2-207ENST00000619399 994 ntTSL 5 BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 AL672207.1-201ENST00000328462 1570 ntBASIC21.71■■□□□ 1.07
SYCP2Q9BX26 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 AC008894.3-201ENST00000624324 3103 ntBASIC21.71■■□□□ 1.07
SYCP2Q9BX26 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYCP2Q9BX26 BCL2-203ENST00000589955 5011 ntBASIC21.71■■□□□ 1.07
SYCP2Q9BX26 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC21.7■■□□□ 1.07
SYCP2Q9BX26 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC21.7■■□□□ 1.07
SYCP2Q9BX26 AQP7P5-201ENST00000428759 1049 ntBASIC21.7■■□□□ 1.07
SYCP2Q9BX26 AQP7P4-201ENST00000447083 1042 ntBASIC21.7■■□□□ 1.07
SYCP2Q9BX26 AQP7P2-201ENST00000453967 1041 ntBASIC21.7■■□□□ 1.07
SYCP2Q9BX26 RN7SL23P-201ENST00000484055 275 ntBASIC21.7■■□□□ 1.07
SYCP2Q9BX26 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC21.7■■□□□ 1.07
SYCP2Q9BX26 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC21.7■■□□□ 1.07
SYCP2Q9BX26 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC21.7■■□□□ 1.07
SYCP2Q9BX26 AQP7P3-201ENST00000624547 1041 ntBASIC21.7■■□□□ 1.07
SYCP2Q9BX26 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.07
SYCP2Q9BX26 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 PLAC9-203ENST00000372270 534 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 KRT18P46-201ENST00000435568 1279 ntBASIC21.7■■□□□ 1.06
SYCP2Q9BX26 GNG10P1-201ENST00000452289 199 ntBASIC21.7■■□□□ 1.06
SYCP2Q9BX26 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 AC012213.1-201ENST00000517376 722 ntTSL 3 BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 USB1-205ENST00000561743 1135 ntTSL 3 BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 AC140658.4-201ENST00000561990 352 ntBASIC21.7■■□□□ 1.06
SYCP2Q9BX26 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
SYCP2Q9BX26 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYCP2Q9BX26 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC21.69■■□□□ 1.06
SYCP2Q9BX26 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYCP2Q9BX26 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC21.69■■□□□ 1.06
SYCP2Q9BX26 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
SYCP2Q9BX26 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC21.69■■□□□ 1.06
SYCP2Q9BX26 AL513315.1-201ENST00000640756 1370 ntTSL 5 BASIC21.69■■□□□ 1.06
SYCP2Q9BX26 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYCP2Q9BX26 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYCP2Q9BX26 AC019109.1-201ENST00000401725 1874 ntBASIC21.69■■□□□ 1.06
SYCP2Q9BX26 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYCP2Q9BX26 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SYCP2Q9BX26 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYCP2Q9BX26 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SYCP2Q9BX26 BAX-205ENST00000391871 687 ntTSL 5 BASIC21.69■■□□□ 1.06
SYCP2Q9BX26 ACTG1P19-201ENST00000418987 1116 ntBASIC21.69■■□□□ 1.06
SYCP2Q9BX26 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SYCP2Q9BX26 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms