Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VGLL1Q99990 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
VGLL1Q99990 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
VGLL1Q99990 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VGLL1Q99990 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC11.39□□□□□ -0.59
VGLL1Q99990 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VGLL1Q99990 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC11.39□□□□□ -0.59
VGLL1Q99990 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VGLL1Q99990 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
VGLL1Q99990 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC11.39□□□□□ -0.59
VGLL1Q99990 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC11.39□□□□□ -0.59
VGLL1Q99990 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
VGLL1Q99990 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VGLL1Q99990 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC11.39□□□□□ -0.59
VGLL1Q99990 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VGLL1Q99990 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC11.39□□□□□ -0.59
VGLL1Q99990 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC11.39□□□□□ -0.59
VGLL1Q99990 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
VGLL1Q99990 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
VGLL1Q99990 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
VGLL1Q99990 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
VGLL1Q99990 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.39□□□□□ -0.59
VGLL1Q99990 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
VGLL1Q99990 PKIG-203ENST00000372887 769 ntTSL 3 BASIC11.39□□□□□ -0.59
VGLL1Q99990 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC11.39□□□□□ -0.59
VGLL1Q99990 KRT18P13-201ENST00000400056 1290 ntBASIC11.39□□□□□ -0.59
VGLL1Q99990 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC11.39□□□□□ -0.59
VGLL1Q99990 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
VGLL1Q99990 TPT1P11-201ENST00000458482 498 ntBASIC11.39□□□□□ -0.59
VGLL1Q99990 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC11.39□□□□□ -0.59
VGLL1Q99990 AC109322.1-201ENST00000524499 1264 ntBASIC11.39□□□□□ -0.59
VGLL1Q99990 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC11.39□□□□□ -0.59
VGLL1Q99990 TIMM17BP1-201ENST00000545713 516 ntBASIC11.39□□□□□ -0.59
VGLL1Q99990 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
VGLL1Q99990 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
VGLL1Q99990 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC11.39□□□□□ -0.59
VGLL1Q99990 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC11.39□□□□□ -0.59
VGLL1Q99990 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC11.39□□□□□ -0.59
VGLL1Q99990 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC11.39□□□□□ -0.59
VGLL1Q99990 AC073592.8-201ENST00000624126 511 ntBASIC11.39□□□□□ -0.59
VGLL1Q99990 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC11.39□□□□□ -0.59
VGLL1Q99990 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC11.39□□□□□ -0.59
VGLL1Q99990 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.39□□□□□ -0.59
VGLL1Q99990 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
VGLL1Q99990 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VGLL1Q99990 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC11.39□□□□□ -0.59
VGLL1Q99990 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.39□□□□□ -0.59
VGLL1Q99990 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
VGLL1Q99990 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC11.39□□□□□ -0.59
VGLL1Q99990 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
VGLL1Q99990 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VGLL1Q99990 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VGLL1Q99990 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VGLL1Q99990 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VGLL1Q99990 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC11.39□□□□□ -0.59
VGLL1Q99990 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC11.39□□□□□ -0.59
VGLL1Q99990 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
VGLL1Q99990 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
VGLL1Q99990 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
VGLL1Q99990 AL137783.1-201ENST00000623494 1896 ntBASIC11.38□□□□□ -0.59
VGLL1Q99990 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
VGLL1Q99990 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC11.38□□□□□ -0.59
VGLL1Q99990 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
VGLL1Q99990 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 AL354702.1-201ENST00000442006 1960 ntBASIC11.38□□□□□ -0.59
VGLL1Q99990 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
VGLL1Q99990 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC11.38□□□□□ -0.59
VGLL1Q99990 HAL-202ENST00000538703 2637 ntTSL 2 BASIC11.38□□□□□ -0.59
VGLL1Q99990 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
VGLL1Q99990 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
VGLL1Q99990 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC11.38□□□□□ -0.59
VGLL1Q99990 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC11.38□□□□□ -0.59
VGLL1Q99990 AC004967.1-201ENST00000453589 447 ntBASIC11.38□□□□□ -0.59
VGLL1Q99990 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC11.38□□□□□ -0.59
VGLL1Q99990 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC11.38□□□□□ -0.59
VGLL1Q99990 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
VGLL1Q99990 AC027369.6-201ENST00000525520 931 ntBASIC11.38□□□□□ -0.59
VGLL1Q99990 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC11.38□□□□□ -0.59
VGLL1Q99990 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
VGLL1Q99990 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC11.38□□□□□ -0.59
VGLL1Q99990 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC11.38□□□□□ -0.59
VGLL1Q99990 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
VGLL1Q99990 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms