Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SNX18Q96RF0 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.7□□□□□ -0.22
SNX18Q96RF0 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.7□□□□□ -0.22
SNX18Q96RF0 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.7□□□□□ -0.22
SNX18Q96RF0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC13.7□□□□□ -0.22
SNX18Q96RF0 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
SNX18Q96RF0 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 AC004066.1-201ENST00000502488 802 ntBASIC13.7□□□□□ -0.22
SNX18Q96RF0 GAPDHP40-201ENST00000505218 1006 ntBASIC13.7□□□□□ -0.22
SNX18Q96RF0 SERBP1P5-201ENST00000510079 1181 ntBASIC13.7□□□□□ -0.22
SNX18Q96RF0 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC13.7□□□□□ -0.22
SNX18Q96RF0 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.7□□□□□ -0.22
SNX18Q96RF0 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 AC044860.1-202ENST00000559481 777 ntBASIC13.7□□□□□ -0.22
SNX18Q96RF0 AC012645.4-201ENST00000610691 1061 ntBASIC13.7□□□□□ -0.22
SNX18Q96RF0 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.7□□□□□ -0.22
SNX18Q96RF0 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.7□□□□□ -0.22
SNX18Q96RF0 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
SNX18Q96RF0 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC13.7□□□□□ -0.22
SNX18Q96RF0 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.7□□□□□ -0.22
SNX18Q96RF0 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 AC067750.1-201ENST00000608826 6545 ntBASIC13.7□□□□□ -0.22
SNX18Q96RF0 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.7□□□□□ -0.22
SNX18Q96RF0 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.7□□□□□ -0.22
SNX18Q96RF0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.7□□□□□ -0.22
SNX18Q96RF0 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SNX18Q96RF0 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
SNX18Q96RF0 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
SNX18Q96RF0 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.7□□□□□ -0.22
SNX18Q96RF0 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
SNX18Q96RF0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.69□□□□□ -0.22
SNX18Q96RF0 AMT-221ENST00000538581 2038 ntTSL 2 BASIC13.69□□□□□ -0.22
SNX18Q96RF0 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.69□□□□□ -0.22
SNX18Q96RF0 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC13.69□□□□□ -0.22
SNX18Q96RF0 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.69□□□□□ -0.22
SNX18Q96RF0 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
SNX18Q96RF0 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
SNX18Q96RF0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SNX18Q96RF0 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC13.69□□□□□ -0.22
SNX18Q96RF0 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.69□□□□□ -0.22
SNX18Q96RF0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.69□□□□□ -0.22
SNX18Q96RF0 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.69□□□□□ -0.22
SNX18Q96RF0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
SNX18Q96RF0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.69□□□□□ -0.22
SNX18Q96RF0 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.69□□□□□ -0.22
SNX18Q96RF0 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
SNX18Q96RF0 AL391069.4-201ENST00000609583 481 ntBASIC13.69□□□□□ -0.22
SNX18Q96RF0 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.69□□□□□ -0.22
SNX18Q96RF0 AL035252.4-201ENST00000624174 288 ntBASIC13.69□□□□□ -0.22
SNX18Q96RF0 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.69□□□□□ -0.22
SNX18Q96RF0 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SNX18Q96RF0 KLHL34-201ENST00000379499 3641 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
SNX18Q96RF0 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
SNX18Q96RF0 AC022144.1-201ENST00000602255 1580 ntBASIC13.69□□□□□ -0.22
SNX18Q96RF0 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
SNX18Q96RF0 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.69□□□□□ -0.22
SNX18Q96RF0 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
SNX18Q96RF0 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms