Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 MIR6080-201ENST00000617359 66 ntBASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 ELL2P1-201ENST00000413990 1906 ntBASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC14.15□□□□□ -0.14
NSMCE2Q96MF7 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 AC020910.6-201ENST00000623084 1459 ntBASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 CEND1P1-201ENST00000451006 455 ntBASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 ALG1L5P-201ENST00000482043 771 ntBASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 PUS1-205ENST00000535067 838 ntTSL 3 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 AC120114.3-201ENST00000611923 658 ntBASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 CICP20-201ENST00000443330 2801 ntBASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 PPT1-213ENST00000641319 2388 ntBASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
NSMCE2Q96MF7 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 GOLGA6L17P-202ENST00000614358 1398 ntBASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 AC004832.2-201ENST00000426397 482 ntBASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 AC093520.2-201ENST00000561830 333 ntBASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.13□□□□□ -0.15
NSMCE2Q96MF7 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms