Protein–RNA interactions for Protein: Q96M96

FGD4, FYVE, RhoGEF and PH domain-containing protein 4, humanhuman

Predictions only

Length 766 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4Q96M96 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FGD4Q96M96 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FGD4Q96M96 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
FGD4Q96M96 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FGD4Q96M96 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC16.82■□□□□ 0.28
FGD4Q96M96 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
FGD4Q96M96 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FGD4Q96M96 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC16.82■□□□□ 0.28
FGD4Q96M96 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FGD4Q96M96 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
FGD4Q96M96 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.82■□□□□ 0.28
FGD4Q96M96 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.82■□□□□ 0.28
FGD4Q96M96 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.82■□□□□ 0.28
FGD4Q96M96 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.82■□□□□ 0.28
FGD4Q96M96 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
FGD4Q96M96 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
FGD4Q96M96 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC16.82■□□□□ 0.28
FGD4Q96M96 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC16.82■□□□□ 0.28
FGD4Q96M96 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC16.82■□□□□ 0.28
FGD4Q96M96 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.82■□□□□ 0.28
FGD4Q96M96 AL157813.1-201ENST00000612996 587 ntBASIC16.82■□□□□ 0.28
FGD4Q96M96 AC006453.1-201ENST00000636037 1257 ntBASIC16.82■□□□□ 0.28
FGD4Q96M96 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FGD4Q96M96 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.82■□□□□ 0.28
FGD4Q96M96 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
FGD4Q96M96 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FGD4Q96M96 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
FGD4Q96M96 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
FGD4Q96M96 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC16.82■□□□□ 0.28
FGD4Q96M96 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FGD4Q96M96 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.81■□□□□ 0.28
FGD4Q96M96 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
FGD4Q96M96 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
FGD4Q96M96 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FGD4Q96M96 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FGD4Q96M96 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FGD4Q96M96 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FGD4Q96M96 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FGD4Q96M96 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC16.81■□□□□ 0.28
FGD4Q96M96 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
FGD4Q96M96 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FGD4Q96M96 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FGD4Q96M96 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.81■□□□□ 0.28
FGD4Q96M96 AC092978.1-201ENST00000474979 1309 ntTSL 5 BASIC16.81■□□□□ 0.28
FGD4Q96M96 AC092978.1-202ENST00000637590 1327 ntBASIC16.81■□□□□ 0.28
FGD4Q96M96 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FGD4Q96M96 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
FGD4Q96M96 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FGD4Q96M96 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FGD4Q96M96 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
FGD4Q96M96 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FGD4Q96M96 AC006122.1-201ENST00000493323 440 ntBASIC16.81■□□□□ 0.28
FGD4Q96M96 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC16.81■□□□□ 0.28
FGD4Q96M96 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
FGD4Q96M96 AC012044.1-201ENST00000603431 297 ntBASIC16.81■□□□□ 0.28
FGD4Q96M96 U62317.3-201ENST00000608319 855 ntBASIC16.81■□□□□ 0.28
FGD4Q96M96 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC16.81■□□□□ 0.28
FGD4Q96M96 AC027601.3-201ENST00000622907 509 ntBASIC16.81■□□□□ 0.28
FGD4Q96M96 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FGD4Q96M96 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
FGD4Q96M96 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
FGD4Q96M96 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
FGD4Q96M96 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FGD4Q96M96 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
FGD4Q96M96 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.81■□□□□ 0.28
FGD4Q96M96 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
FGD4Q96M96 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
FGD4Q96M96 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.8■□□□□ 0.28
FGD4Q96M96 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FGD4Q96M96 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FGD4Q96M96 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.8■□□□□ 0.28
FGD4Q96M96 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
FGD4Q96M96 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FGD4Q96M96 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.8■□□□□ 0.28
FGD4Q96M96 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC16.8■□□□□ 0.28
FGD4Q96M96 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
FGD4Q96M96 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.8■□□□□ 0.28
FGD4Q96M96 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FGD4Q96M96 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
FGD4Q96M96 AC006480.2-201ENST00000609770 1337 ntBASIC16.8■□□□□ 0.28
FGD4Q96M96 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC16.8■□□□□ 0.28
FGD4Q96M96 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
FGD4Q96M96 TMBIM7P-203ENST00000641617 1718 ntBASIC16.8■□□□□ 0.28
FGD4Q96M96 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FGD4Q96M96 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FGD4Q96M96 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
FGD4Q96M96 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
FGD4Q96M96 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FGD4Q96M96 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
FGD4Q96M96 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC16.8■□□□□ 0.28
FGD4Q96M96 AL353637.1-201ENST00000451571 732 ntBASIC16.8■□□□□ 0.28
FGD4Q96M96 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC16.8■□□□□ 0.28
FGD4Q96M96 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.8■□□□□ 0.28
FGD4Q96M96 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.8■□□□□ 0.28
FGD4Q96M96 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC16.8■□□□□ 0.28
FGD4Q96M96 VPS18-202ENST00000558474 873 ntTSL 3 BASIC16.8■□□□□ 0.28
FGD4Q96M96 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.8■□□□□ 0.28
FGD4Q96M96 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.8■□□□□ 0.28
FGD4Q96M96 NAP1L6-202ENST00000641404 1222 ntBASIC16.8■□□□□ 0.28
FGD4Q96M96 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms