Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RFT1Q96AA3 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.31□□□□□ -0.28
RFT1Q96AA3 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RFT1Q96AA3 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RFT1Q96AA3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RFT1Q96AA3 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RFT1Q96AA3 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RFT1Q96AA3 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC13.31□□□□□ -0.28
RFT1Q96AA3 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RFT1Q96AA3 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RFT1Q96AA3 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC13.31□□□□□ -0.28
RFT1Q96AA3 AL080243.2-201ENST00000418783 582 ntBASIC13.31□□□□□ -0.28
RFT1Q96AA3 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.31□□□□□ -0.28
RFT1Q96AA3 SPDYE7P-202ENST00000420373 878 ntBASIC13.31□□□□□ -0.28
RFT1Q96AA3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC13.31□□□□□ -0.28
RFT1Q96AA3 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.31□□□□□ -0.28
RFT1Q96AA3 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.31□□□□□ -0.28
RFT1Q96AA3 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RFT1Q96AA3 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RFT1Q96AA3 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RFT1Q96AA3 AL596442.2-201ENST00000610240 980 ntBASIC13.31□□□□□ -0.28
RFT1Q96AA3 AP001059.3-201ENST00000619053 235 ntBASIC13.31□□□□□ -0.28
RFT1Q96AA3 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.31□□□□□ -0.28
RFT1Q96AA3 AF228730.6-201ENST00000641497 218 ntBASIC13.31□□□□□ -0.28
RFT1Q96AA3 AC084121.3-201ENST00000641716 218 ntBASIC13.31□□□□□ -0.28
RFT1Q96AA3 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.31□□□□□ -0.28
RFT1Q96AA3 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.31□□□□□ -0.28
RFT1Q96AA3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.31□□□□□ -0.28
RFT1Q96AA3 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC13.31□□□□□ -0.28
RFT1Q96AA3 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RFT1Q96AA3 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.31□□□□□ -0.28
RFT1Q96AA3 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.31□□□□□ -0.28
RFT1Q96AA3 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RFT1Q96AA3 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
RFT1Q96AA3 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
RFT1Q96AA3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RFT1Q96AA3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RFT1Q96AA3 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RFT1Q96AA3 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RFT1Q96AA3 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
RFT1Q96AA3 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
RFT1Q96AA3 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
RFT1Q96AA3 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RFT1Q96AA3 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
RFT1Q96AA3 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
RFT1Q96AA3 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
RFT1Q96AA3 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 CNN2P11-201ENST00000429351 262 ntBASIC13.3□□□□□ -0.28
RFT1Q96AA3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 RIPOR3-202ENST00000327979 4377 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
RFT1Q96AA3 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
RFT1Q96AA3 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms