Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 C2orf69P2-201ENST00000562032 1123 ntBASIC13.11□□□□□ -0.31
TMEM54Q969K7 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
TMEM54Q969K7 MIR4683-201ENST00000579659 81 ntBASIC13.11□□□□□ -0.31
TMEM54Q969K7 AL512343.1-201ENST00000605837 169 ntBASIC13.11□□□□□ -0.31
TMEM54Q969K7 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.11□□□□□ -0.31
TMEM54Q969K7 AL035252.4-201ENST00000624174 288 ntBASIC13.11□□□□□ -0.31
TMEM54Q969K7 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
TMEM54Q969K7 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM54Q969K7 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM54Q969K7 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
TMEM54Q969K7 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TMEM54Q969K7 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TMEM54Q969K7 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.11□□□□□ -0.31
TMEM54Q969K7 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
TMEM54Q969K7 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 AL590440.2-201ENST00000641973 1595 ntBASIC13.11□□□□□ -0.31
TMEM54Q969K7 AHCYP2-201ENST00000430630 1300 ntBASIC13.11□□□□□ -0.31
TMEM54Q969K7 AC063926.2-201ENST00000623766 1308 ntBASIC13.11□□□□□ -0.31
TMEM54Q969K7 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
TMEM54Q969K7 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
TMEM54Q969K7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 KLF2P4-201ENST00000451959 1225 ntBASIC13.1□□□□□ -0.31
TMEM54Q969K7 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 AC079316.1-201ENST00000548397 411 ntBASIC13.1□□□□□ -0.31
TMEM54Q969K7 RAB43P1-201ENST00000561790 589 ntBASIC13.1□□□□□ -0.31
TMEM54Q969K7 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 ZACNP1-201ENST00000612259 710 ntBASIC13.1□□□□□ -0.31
TMEM54Q969K7 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 AC139712.1-201ENST00000378256 1875 ntBASIC13.1□□□□□ -0.31
TMEM54Q969K7 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.1□□□□□ -0.31
TMEM54Q969K7 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
TMEM54Q969K7 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM54Q969K7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM54Q969K7 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM54Q969K7 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM54Q969K7 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM54Q969K7 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM54Q969K7 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM54Q969K7 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
TMEM54Q969K7 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
TMEM54Q969K7 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.09□□□□□ -0.31
TMEM54Q969K7 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 81.7 ms