Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 METTL21AP1-201ENST00000438852 635 ntBASIC17■□□□□ 0.31
ERCC4Q92889 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC17■□□□□ 0.31
ERCC4Q92889 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
ERCC4Q92889 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC17■□□□□ 0.31
ERCC4Q92889 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC17■□□□□ 0.31
ERCC4Q92889 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17■□□□□ 0.31
ERCC4Q92889 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17■□□□□ 0.31
ERCC4Q92889 VDAC1P7-201ENST00000462417 847 ntBASIC17■□□□□ 0.31
ERCC4Q92889 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17■□□□□ 0.31
ERCC4Q92889 AC004890.2-204ENST00000481968 304 ntBASIC17■□□□□ 0.31
ERCC4Q92889 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC17■□□□□ 0.31
ERCC4Q92889 AC023310.3-201ENST00000557027 670 ntBASIC17■□□□□ 0.31
ERCC4Q92889 AC100756.1-201ENST00000562736 682 ntBASIC17■□□□□ 0.31
ERCC4Q92889 AC138749.3-201ENST00000567691 622 ntBASIC17■□□□□ 0.31
ERCC4Q92889 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17■□□□□ 0.31
ERCC4Q92889 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17■□□□□ 0.31
ERCC4Q92889 AL390955.2-201ENST00000603032 514 ntBASIC17■□□□□ 0.31
ERCC4Q92889 AC116165.1-201ENST00000611806 668 ntBASIC17■□□□□ 0.31
ERCC4Q92889 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17■□□□□ 0.31
ERCC4Q92889 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC4Q92889 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC17■□□□□ 0.31
ERCC4Q92889 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
ERCC4Q92889 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC17■□□□□ 0.31
ERCC4Q92889 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC4Q92889 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC4Q92889 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
ERCC4Q92889 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC4Q92889 CICP16-201ENST00000502609 2813 ntBASIC17■□□□□ 0.31
ERCC4Q92889 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC4Q92889 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC4Q92889 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC4Q92889 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC4Q92889 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
ERCC4Q92889 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC4Q92889 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC4Q92889 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC4Q92889 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC4Q92889 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC16.99■□□□□ 0.31
ERCC4Q92889 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC16.99■□□□□ 0.31
ERCC4Q92889 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
ERCC4Q92889 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.99■□□□□ 0.31
ERCC4Q92889 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC4Q92889 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC4Q92889 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC16.99■□□□□ 0.31
ERCC4Q92889 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.99■□□□□ 0.31
ERCC4Q92889 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC4Q92889 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC4Q92889 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC4Q92889 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC4Q92889 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC4Q92889 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC4Q92889 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC4Q92889 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.99■□□□□ 0.31
ERCC4Q92889 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC16.99■□□□□ 0.31
ERCC4Q92889 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.99■□□□□ 0.31
ERCC4Q92889 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC4Q92889 FAM86LP-201ENST00000478302 853 ntBASIC16.99■□□□□ 0.31
ERCC4Q92889 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC4Q92889 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC16.99■□□□□ 0.31
ERCC4Q92889 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.99■□□□□ 0.31
ERCC4Q92889 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC4Q92889 AL138799.1-201ENST00000448213 1675 ntBASIC16.99■□□□□ 0.31
ERCC4Q92889 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC4Q92889 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
ERCC4Q92889 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
ERCC4Q92889 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
ERCC4Q92889 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
ERCC4Q92889 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
ERCC4Q92889 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.99■□□□□ 0.31
ERCC4Q92889 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC4Q92889 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC4Q92889 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
ERCC4Q92889 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.99■□□□□ 0.31
ERCC4Q92889 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC4Q92889 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC4Q92889 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ERCC4Q92889 AC089987.1-201ENST00000551654 2209 ntBASIC16.98■□□□□ 0.31
ERCC4Q92889 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC4Q92889 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC4Q92889 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC4Q92889 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
ERCC4Q92889 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.98■□□□□ 0.31
ERCC4Q92889 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC4Q92889 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ERCC4Q92889 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC4Q92889 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC4Q92889 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC16.98■□□□□ 0.31
ERCC4Q92889 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC4Q92889 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC4Q92889 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC4Q92889 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC4Q92889 MRPS18AP1-201ENST00000414458 589 ntBASIC16.98■□□□□ 0.31
ERCC4Q92889 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.98■□□□□ 0.31
ERCC4Q92889 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.98■□□□□ 0.31
ERCC4Q92889 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.98■□□□□ 0.31
ERCC4Q92889 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.98■□□□□ 0.31
ERCC4Q92889 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.98■□□□□ 0.31
ERCC4Q92889 AC067863.1-201ENST00000494933 530 ntBASIC16.98■□□□□ 0.31
ERCC4Q92889 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ERCC4Q92889 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms