Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 BCAS2P2-201ENST00000425064 674 ntBASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 RPL18AP8-201ENST00000486071 528 ntBASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 AC084752.1-201ENST00000509766 622 ntBASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 HERC2P11-201ENST00000562845 725 ntBASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 AL022344.2-201ENST00000568976 968 ntBASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 AC100756.2-201ENST00000569537 736 ntBASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 AC007250.1-201ENST00000608934 338 ntBASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 PAUPAR-201ENST00000630360 2965 ntBASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 AC136621.1-201ENST00000624017 2304 ntBASIC16.16■□□□□ 0.18
KLHDC9Q8NEP7 KHSRPP1-201ENST00000427983 1768 ntBASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 AC092580.1-201ENST00000433998 658 ntBASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 CD164-210ENST00000512821 964 ntTSL 2 BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 DRG2-220ENST00000583355 891 ntTSL 3 BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 MIR2392-201ENST00000584881 84 ntBASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 AP000322.3-201ENST00000608665 388 ntBASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 AC006158.1-201ENST00000610661 249 ntBASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 AC138466.4-201ENST00000623965 852 ntBASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 AC006504.5-208ENST00000588784 2401 ntBASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.15■□□□□ 0.18
KLHDC9Q8NEP7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
KLHDC9Q8NEP7 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.18
KLHDC9Q8NEP7 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC16.14■□□□□ 0.18
KLHDC9Q8NEP7 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
KLHDC9Q8NEP7 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 MIR645-201ENST00000385283 94 ntBASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 PPOX-204ENST00000462866 473 ntTSL 5 BASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 HYMAI-201ENST00000635591 3347 ntBASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.14■□□□□ 0.17
KLHDC9Q8NEP7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms