Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.11□□□□□ -0.31
CPEB3Q8NE35 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC13.11□□□□□ -0.31
CPEB3Q8NE35 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPEB3Q8NE35 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.11□□□□□ -0.31
CPEB3Q8NE35 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPEB3Q8NE35 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPEB3Q8NE35 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.11□□□□□ -0.31
CPEB3Q8NE35 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPEB3Q8NE35 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.11□□□□□ -0.31
CPEB3Q8NE35 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
CPEB3Q8NE35 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.11□□□□□ -0.31
CPEB3Q8NE35 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
CPEB3Q8NE35 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPEB3Q8NE35 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPEB3Q8NE35 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPEB3Q8NE35 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPEB3Q8NE35 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPEB3Q8NE35 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPEB3Q8NE35 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
CPEB3Q8NE35 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 AC025279.2-201ENST00000569730 653 ntBASIC13.1□□□□□ -0.31
CPEB3Q8NE35 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 ENPP7P14-201ENST00000621765 1040 ntBASIC13.1□□□□□ -0.31
CPEB3Q8NE35 AC132938.4-201ENST00000623835 848 ntBASIC13.1□□□□□ -0.31
CPEB3Q8NE35 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 AL390755.1-201ENST00000623716 2027 ntBASIC13.1□□□□□ -0.31
CPEB3Q8NE35 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.1□□□□□ -0.31
CPEB3Q8NE35 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 AL137784.3-201ENST00000623858 2288 ntBASIC13.09□□□□□ -0.31
CPEB3Q8NE35 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 PGF-202ENST00000405431 666 ntTSL 5 BASIC13.09□□□□□ -0.31
CPEB3Q8NE35 POM121L8P-201ENST00000417732 1281 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms