Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
ZNF248Q8NDW4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 AC026316.1-201ENST00000398900 414 ntBASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 AC125604.1-201ENST00000496255 707 ntBASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 AC012044.1-201ENST00000603431 297 ntBASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 AC007787.1-201ENST00000588095 1583 ntBASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 AL158070.2-201ENST00000623713 1621 ntBASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 AC004899.1-201ENST00000424687 1714 ntBASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 AC022532.1-201ENST00000624563 1728 ntBASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 AC020658.6-201ENST00000623564 1870 ntBASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
ZNF248Q8NDW4 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 GHSR-202ENST00000427970 912 ntBASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 IGLV3-15-201ENST00000518356 244 ntBASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 AC090857.1-201ENST00000527400 390 ntBASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 AC073352.2-201ENST00000609385 439 ntBASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 AF254983.2-201ENST00000612331 135 ntBASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC14.28□□□□□ -0.12
ZNF248Q8NDW4 AC103691.2-201ENST00000618824 433 ntBASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms