Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C3orf56Q8N813 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C3orf56Q8N813 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
C3orf56Q8N813 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC11.73□□□□□ -0.53
C3orf56Q8N813 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C3orf56Q8N813 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
C3orf56Q8N813 AC239868.1-201ENST00000369385 493 ntBASIC11.73□□□□□ -0.53
C3orf56Q8N813 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC11.73□□□□□ -0.53
C3orf56Q8N813 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C3orf56Q8N813 MIR648-201ENST00000385046 94 ntBASIC11.73□□□□□ -0.53
C3orf56Q8N813 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
C3orf56Q8N813 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC11.73□□□□□ -0.53
C3orf56Q8N813 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
C3orf56Q8N813 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC11.73□□□□□ -0.53
C3orf56Q8N813 RNF216P1-203ENST00000404404 2427 ntBASIC11.73□□□□□ -0.53
C3orf56Q8N813 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC11.73□□□□□ -0.53
C3orf56Q8N813 CLUHP2-201ENST00000426660 1303 ntBASIC11.73□□□□□ -0.53
C3orf56Q8N813 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
C3orf56Q8N813 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
C3orf56Q8N813 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
C3orf56Q8N813 RN7SL258P-201ENST00000478664 300 ntBASIC11.73□□□□□ -0.53
C3orf56Q8N813 RN7SL67P-201ENST00000492147 296 ntBASIC11.73□□□□□ -0.53
C3orf56Q8N813 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC11.73□□□□□ -0.53
C3orf56Q8N813 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
C3orf56Q8N813 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
C3orf56Q8N813 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC11.73□□□□□ -0.53
C3orf56Q8N813 AC141586.1-203ENST00000567242 366 ntBASIC11.73□□□□□ -0.53
C3orf56Q8N813 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC11.73□□□□□ -0.53
C3orf56Q8N813 MIR4683-201ENST00000579659 81 ntBASIC11.73□□□□□ -0.53
C3orf56Q8N813 MIR4649-201ENST00000582839 64 ntBASIC11.73□□□□□ -0.53
C3orf56Q8N813 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
C3orf56Q8N813 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC11.73□□□□□ -0.53
C3orf56Q8N813 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC11.73□□□□□ -0.53
C3orf56Q8N813 AL161772.1-201ENST00000610494 4412 ntBASIC11.73□□□□□ -0.53
C3orf56Q8N813 AC087392.5-201ENST00000612517 489 ntBASIC11.73□□□□□ -0.53
C3orf56Q8N813 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
C3orf56Q8N813 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
C3orf56Q8N813 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
C3orf56Q8N813 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C3orf56Q8N813 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
C3orf56Q8N813 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C3orf56Q8N813 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C3orf56Q8N813 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC11.73□□□□□ -0.53
C3orf56Q8N813 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC11.73□□□□□ -0.53
C3orf56Q8N813 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C3orf56Q8N813 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
C3orf56Q8N813 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
C3orf56Q8N813 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC11.73□□□□□ -0.53
C3orf56Q8N813 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C3orf56Q8N813 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C3orf56Q8N813 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC11.73□□□□□ -0.53
C3orf56Q8N813 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
C3orf56Q8N813 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C3orf56Q8N813 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC11.72□□□□□ -0.53
C3orf56Q8N813 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
C3orf56Q8N813 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
C3orf56Q8N813 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C3orf56Q8N813 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.72□□□□□ -0.53
C3orf56Q8N813 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.72□□□□□ -0.53
C3orf56Q8N813 BID-213ENST00000615414 2236 ntTSL 5 BASIC11.72□□□□□ -0.53
C3orf56Q8N813 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
C3orf56Q8N813 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
C3orf56Q8N813 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
C3orf56Q8N813 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
C3orf56Q8N813 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C3orf56Q8N813 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C3orf56Q8N813 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC11.72□□□□□ -0.53
C3orf56Q8N813 AMT-204ENST00000427987 1646 ntTSL 5 BASIC11.72□□□□□ -0.53
C3orf56Q8N813 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
C3orf56Q8N813 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
C3orf56Q8N813 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
C3orf56Q8N813 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
C3orf56Q8N813 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC11.72□□□□□ -0.53
C3orf56Q8N813 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC11.72□□□□□ -0.53
C3orf56Q8N813 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
C3orf56Q8N813 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
C3orf56Q8N813 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
C3orf56Q8N813 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
C3orf56Q8N813 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC11.72□□□□□ -0.53
C3orf56Q8N813 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
C3orf56Q8N813 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
C3orf56Q8N813 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
C3orf56Q8N813 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
C3orf56Q8N813 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
C3orf56Q8N813 IDS-203ENST00000428056 1213 ntTSL 2 BASIC11.72□□□□□ -0.53
C3orf56Q8N813 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
C3orf56Q8N813 AC012441.2-201ENST00000444843 739 ntBASIC11.72□□□□□ -0.53
C3orf56Q8N813 AC018463.1-201ENST00000456674 917 ntBASIC11.72□□□□□ -0.53
C3orf56Q8N813 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC11.72□□□□□ -0.53
C3orf56Q8N813 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC11.72□□□□□ -0.53
C3orf56Q8N813 AC009779.1-201ENST00000551138 283 ntBASIC11.72□□□□□ -0.53
C3orf56Q8N813 DUX4L46-201ENST00000566845 751 ntBASIC11.72□□□□□ -0.53
C3orf56Q8N813 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC11.72□□□□□ -0.53
C3orf56Q8N813 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC11.72□□□□□ -0.53
C3orf56Q8N813 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
C3orf56Q8N813 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
C3orf56Q8N813 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
C3orf56Q8N813 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
C3orf56Q8N813 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
C3orf56Q8N813 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms