Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 BAATP1-201ENST00000412284 1225 ntBASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 TLE1P1-201ENST00000422965 589 ntBASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 PTP4A1P2-201ENST00000546033 454 ntBASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 AC140479.7-201ENST00000636301 2332 ntBASIC11.85□□□□□ -0.51
TTC9CQ8N5M4 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 AC012441.1-201ENST00000446669 685 ntBASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 AC011495.1-201ENST00000498085 584 ntBASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 AC138761.1-201ENST00000584393 385 ntBASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
TTC9CQ8N5M4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms