Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SIX5Q8N196 HLA-K-203ENST00000430151 1046 ntBASIC15.32■□□□□ 0.04
SIX5Q8N196 VDAC1P1-201ENST00000439229 848 ntBASIC15.32■□□□□ 0.04
SIX5Q8N196 RN7SL67P-201ENST00000492147 296 ntBASIC15.32■□□□□ 0.04
SIX5Q8N196 RBM8B-201ENST00000555532 525 ntBASIC15.32■□□□□ 0.04
SIX5Q8N196 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SIX5Q8N196 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.32■□□□□ 0.04
SIX5Q8N196 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SIX5Q8N196 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SIX5Q8N196 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC15.32■□□□□ 0.04
SIX5Q8N196 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC15.32■□□□□ 0.04
SIX5Q8N196 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SIX5Q8N196 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC15.32■□□□□ 0.04
SIX5Q8N196 AL645728.2-202ENST00000641679 227 ntBASIC15.32■□□□□ 0.04
SIX5Q8N196 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
SIX5Q8N196 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.32■□□□□ 0.04
SIX5Q8N196 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX5Q8N196 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX5Q8N196 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC15.32■□□□□ 0.04
SIX5Q8N196 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX5Q8N196 FAM90A2P-201ENST00000511144 1395 ntBASIC15.32■□□□□ 0.04
SIX5Q8N196 FAM90A25P-201ENST00000528404 1395 ntBASIC15.32■□□□□ 0.04
SIX5Q8N196 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.32■□□□□ 0.04
SIX5Q8N196 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.32■□□□□ 0.04
SIX5Q8N196 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
SIX5Q8N196 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC15.32■□□□□ 0.04
SIX5Q8N196 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
SIX5Q8N196 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX5Q8N196 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SIX5Q8N196 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.32■□□□□ 0.04
SIX5Q8N196 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
SIX5Q8N196 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
SIX5Q8N196 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
SIX5Q8N196 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
SIX5Q8N196 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
SIX5Q8N196 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX5Q8N196 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX5Q8N196 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.31■□□□□ 0.04
SIX5Q8N196 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.31■□□□□ 0.04
SIX5Q8N196 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.31■□□□□ 0.04
SIX5Q8N196 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SIX5Q8N196 MBLAC2-202ENST00000514906 1936 ntBASIC15.31■□□□□ 0.04
SIX5Q8N196 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX5Q8N196 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX5Q8N196 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
SIX5Q8N196 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SIX5Q8N196 KC6-207ENST00000600644 2311 ntTSL 3 BASIC15.31■□□□□ 0.04
SIX5Q8N196 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SIX5Q8N196 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
SIX5Q8N196 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX5Q8N196 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.31■□□□□ 0.04
SIX5Q8N196 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SIX5Q8N196 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX5Q8N196 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX5Q8N196 AC010141.1-201ENST00000411585 623 ntBASIC15.31■□□□□ 0.04
SIX5Q8N196 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.31■□□□□ 0.04
SIX5Q8N196 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.31■□□□□ 0.04
SIX5Q8N196 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC15.31■□□□□ 0.04
SIX5Q8N196 AC008723.1-201ENST00000506922 207 ntBASIC15.31■□□□□ 0.04
SIX5Q8N196 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SIX5Q8N196 FOS-204ENST00000554617 796 ntTSL 2 BASIC15.31■□□□□ 0.04
SIX5Q8N196 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC15.31■□□□□ 0.04
SIX5Q8N196 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.31■□□□□ 0.04
SIX5Q8N196 DNM1P30-201ENST00000563586 452 ntBASIC15.31■□□□□ 0.04
SIX5Q8N196 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.31■□□□□ 0.04
SIX5Q8N196 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC15.31■□□□□ 0.04
SIX5Q8N196 MIR4649-201ENST00000582839 64 ntBASIC15.31■□□□□ 0.04
SIX5Q8N196 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.31■□□□□ 0.04
SIX5Q8N196 AC007881.3-201ENST00000608897 607 ntBASIC15.31■□□□□ 0.04
SIX5Q8N196 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.31■□□□□ 0.04
SIX5Q8N196 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SIX5Q8N196 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC15.31■□□□□ 0.04
SIX5Q8N196 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SIX5Q8N196 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
SIX5Q8N196 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SIX5Q8N196 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
SIX5Q8N196 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SIX5Q8N196 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SIX5Q8N196 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX5Q8N196 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX5Q8N196 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SIX5Q8N196 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX5Q8N196 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX5Q8N196 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC15.31■□□□□ 0.04
SIX5Q8N196 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
SIX5Q8N196 AMT-239ENST00000636865 1914 ntTSL 5 BASIC15.31■□□□□ 0.04
SIX5Q8N196 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SIX5Q8N196 AC009093.2-202ENST00000620513 2079 ntBASIC15.31■□□□□ 0.04
SIX5Q8N196 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SIX5Q8N196 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.31■□□□□ 0.04
SIX5Q8N196 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SIX5Q8N196 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIX5Q8N196 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIX5Q8N196 CICP13-201ENST00000422015 2789 ntBASIC15.3■□□□□ 0.04
SIX5Q8N196 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC15.3■□□□□ 0.04
SIX5Q8N196 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC15.3■□□□□ 0.04
SIX5Q8N196 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIX5Q8N196 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SIX5Q8N196 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SIX5Q8N196 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms