Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LRRC28Q86X40 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.37□□□□□ -0.27
LRRC28Q86X40 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 NIN-202ENST00000324330 4364 ntTSL 5 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 SPTLC1P1-201ENST00000447199 261 ntBASIC13.36□□□□□ -0.27
LRRC28Q86X40 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 AC004840.1-201ENST00000636359 365 ntBASIC13.36□□□□□ -0.27
LRRC28Q86X40 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
LRRC28Q86X40 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LRRC28Q86X40 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC28Q86X40 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC28Q86X40 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC28Q86X40 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRC28Q86X40 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
LRRC28Q86X40 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC28Q86X40 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC28Q86X40 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC28Q86X40 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC28Q86X40 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.35□□□□□ -0.27
LRRC28Q86X40 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC28Q86X40 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC28Q86X40 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.35□□□□□ -0.27
LRRC28Q86X40 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRC28Q86X40 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC28Q86X40 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LRRC28Q86X40 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC28Q86X40 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC28Q86X40 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC28Q86X40 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC13.35□□□□□ -0.27
LRRC28Q86X40 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRC28Q86X40 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC28Q86X40 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC28Q86X40 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LRRC28Q86X40 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC13.35□□□□□ -0.27
LRRC28Q86X40 LHX6-205ENST00000464484 666 ntTSL 2 BASIC13.35□□□□□ -0.27
LRRC28Q86X40 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms