Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 LINC01101-201ENST00000622953 1884 ntBASIC18.67■□□□□ 0.58
PTF1AQ7RTS3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 SAT1-201ENST00000379251 801 ntTSL 2 BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 SAT1-202ENST00000379253 909 ntTSL 2 BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 SAT1-203ENST00000379254 868 ntTSL 3 BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 KRT18P37-201ENST00000520711 1282 ntBASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 LINC00824-204ENST00000520766 597 ntTSL 5 BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 MT2A-202ENST00000561491 581 ntTSL 2 BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 AC023024.2-201ENST00000623561 1993 ntBASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 MSANTD2P1-201ENST00000445341 1368 ntBASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
PTF1AQ7RTS3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 PGLYRP3-201ENST00000290722 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 HINT1-205ENST00000508488 703 ntTSL 2 BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 IGHEP2-201ENST00000519308 1256 ntBASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 AL590235.1-201ENST00000564650 861 ntBASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 AC018846.1-201ENST00000568231 183 ntBASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 NMRK2-202ENST00000593949 869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 NMRK2-204ENST00000599576 691 ntTSL 3 BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 AL109809.1-201ENST00000418979 1367 ntBASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 AC139712.1-201ENST00000378256 1875 ntBASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC18.65■□□□□ 0.58
PTF1AQ7RTS3 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
PTF1AQ7RTS3 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC18.64■□□□□ 0.58
PTF1AQ7RTS3 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
PTF1AQ7RTS3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
PTF1AQ7RTS3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.58
PTF1AQ7RTS3 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms