Protein–RNA interactions for Protein: Q6PD62

CTR9, RNA polymerase-associated protein CTR9 homolog, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9Q6PD62 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CTR9Q6PD62 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CTR9Q6PD62 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.7■□□□□ 0.42
CTR9Q6PD62 SMS-201ENST00000379404 1174 ntTSL 3 BASIC17.7■□□□□ 0.42
CTR9Q6PD62 AC010141.1-201ENST00000411585 623 ntBASIC17.7■□□□□ 0.42
CTR9Q6PD62 HNRNPA1P63-201ENST00000427917 963 ntBASIC17.7■□□□□ 0.42
CTR9Q6PD62 POM121L10P-201ENST00000436994 1285 ntBASIC17.7■□□□□ 0.42
CTR9Q6PD62 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 APOA2-204ENST00000464492 530 ntTSL 3 BASIC17.7■□□□□ 0.42
CTR9Q6PD62 GCOM2-201ENST00000509133 1104 ntBASIC17.7■□□□□ 0.42
CTR9Q6PD62 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC17.7■□□□□ 0.42
CTR9Q6PD62 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.7■□□□□ 0.42
CTR9Q6PD62 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CTR9Q6PD62 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC17.7■□□□□ 0.42
CTR9Q6PD62 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.7■□□□□ 0.42
CTR9Q6PD62 AC243960.2-201ENST00000600996 747 ntBASIC17.7■□□□□ 0.42
CTR9Q6PD62 BX088702.1-201ENST00000610784 235 ntBASIC17.7■□□□□ 0.42
CTR9Q6PD62 MIR6787-201ENST00000616675 61 ntBASIC17.7■□□□□ 0.42
CTR9Q6PD62 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.7■□□□□ 0.42
CTR9Q6PD62 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CTR9Q6PD62 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CTR9Q6PD62 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
CTR9Q6PD62 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC17.7■□□□□ 0.42
CTR9Q6PD62 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CTR9Q6PD62 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTR9Q6PD62 SHC1P1-201ENST00000425230 1745 ntBASIC17.69■□□□□ 0.42
CTR9Q6PD62 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTR9Q6PD62 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC17.69■□□□□ 0.42
CTR9Q6PD62 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTR9Q6PD62 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTR9Q6PD62 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CTR9Q6PD62 AC013726.1-201ENST00000563747 2285 ntBASIC17.69■□□□□ 0.42
CTR9Q6PD62 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTR9Q6PD62 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CTR9Q6PD62 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTR9Q6PD62 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTR9Q6PD62 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTR9Q6PD62 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTR9Q6PD62 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTR9Q6PD62 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC17.69■□□□□ 0.42
CTR9Q6PD62 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTR9Q6PD62 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTR9Q6PD62 MIR1247-201ENST00000408206 136 ntBASIC17.69■□□□□ 0.42
CTR9Q6PD62 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC17.69■□□□□ 0.42
CTR9Q6PD62 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC17.69■□□□□ 0.42
CTR9Q6PD62 ALG3P1-201ENST00000508806 1114 ntBASIC17.69■□□□□ 0.42
CTR9Q6PD62 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC17.69■□□□□ 0.42
CTR9Q6PD62 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC17.69■□□□□ 0.42
CTR9Q6PD62 AL022328.3-201ENST00000607943 679 ntBASIC17.69■□□□□ 0.42
CTR9Q6PD62 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTR9Q6PD62 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC17.69■□□□□ 0.42
CTR9Q6PD62 E2F3P2-201ENST00000447755 1422 ntBASIC17.69■□□□□ 0.42
CTR9Q6PD62 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTR9Q6PD62 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC17.69■□□□□ 0.42
CTR9Q6PD62 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTR9Q6PD62 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTR9Q6PD62 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CTR9Q6PD62 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTR9Q6PD62 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC17.69■□□□□ 0.42
CTR9Q6PD62 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.69■□□□□ 0.42
CTR9Q6PD62 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CTR9Q6PD62 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.68■□□□□ 0.42
CTR9Q6PD62 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.68■□□□□ 0.42
CTR9Q6PD62 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTR9Q6PD62 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTR9Q6PD62 POR-201ENST00000394893 2532 ntTSL 5 BASIC17.68■□□□□ 0.42
CTR9Q6PD62 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTR9Q6PD62 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTR9Q6PD62 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
CTR9Q6PD62 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTR9Q6PD62 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTR9Q6PD62 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTR9Q6PD62 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTR9Q6PD62 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTR9Q6PD62 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTR9Q6PD62 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC17.68■□□□□ 0.42
CTR9Q6PD62 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CTR9Q6PD62 NDUFAB1P1-201ENST00000404262 460 ntBASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms