Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC17.34■□□□□ 0.37
CCDC144BQ3MJ40 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CCDC144BQ3MJ40 AL928921.2-201ENST00000641325 2442 ntBASIC17.33■□□□□ 0.37
CCDC144BQ3MJ40 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC144BQ3MJ40 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC144BQ3MJ40 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC144BQ3MJ40 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC144BQ3MJ40 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC144BQ3MJ40 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
CCDC144BQ3MJ40 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.33■□□□□ 0.37
CCDC144BQ3MJ40 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC144BQ3MJ40 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC144BQ3MJ40 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC144BQ3MJ40 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
CCDC144BQ3MJ40 LRRC59-203ENST00000576448 1531 ntBASIC17.33■□□□□ 0.37
CCDC144BQ3MJ40 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC144BQ3MJ40 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 PFN2-205ENST00000461868 613 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 RHOQP1-201ENST00000555758 579 ntBASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 ACTG1P17-201ENST00000558391 1119 ntBASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 KC6-205ENST00000599934 556 ntTSL 4 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 AL021578.1-201ENST00000613646 709 ntBASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CCDC144BQ3MJ40 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 AL139094.1-201ENST00000405549 1188 ntBASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 AC091804.1-201ENST00000486888 567 ntBASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC144BQ3MJ40 AC015656.1-201ENST00000624209 3578 ntBASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms