Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.41□□□□□ -0.1
PCDH1Q08174 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC14.41□□□□□ -0.1
PCDH1Q08174 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDH1Q08174 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
PCDH1Q08174 AP001889.1-201ENST00000525414 633 ntBASIC14.41□□□□□ -0.1
PCDH1Q08174 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 AC138466.3-201ENST00000619983 221 ntBASIC14.41□□□□□ -0.1
PCDH1Q08174 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDH1Q08174 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDH1Q08174 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
PCDH1Q08174 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 AL122018.1-201ENST00000446607 2310 ntBASIC14.41□□□□□ -0.1
PCDH1Q08174 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.41□□□□□ -0.1
PCDH1Q08174 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
PCDH1Q08174 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
PCDH1Q08174 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
PCDH1Q08174 AP000593.2-201ENST00000542775 1433 ntBASIC14.41□□□□□ -0.1
PCDH1Q08174 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH1Q08174 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH1Q08174 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.4□□□□□ -0.1
PCDH1Q08174 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.4□□□□□ -0.1
PCDH1Q08174 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PCDH1Q08174 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDH1Q08174 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH1Q08174 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH1Q08174 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH1Q08174 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH1Q08174 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH1Q08174 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC14.4□□□□□ -0.1
PCDH1Q08174 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.4□□□□□ -0.1
PCDH1Q08174 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH1Q08174 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDH1Q08174 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDH1Q08174 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH1Q08174 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH1Q08174 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH1Q08174 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PCDH1Q08174 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH1Q08174 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.4□□□□□ -0.1
PCDH1Q08174 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.4□□□□□ -0.1
PCDH1Q08174 AC007389.4-201ENST00000454674 793 ntBASIC14.4□□□□□ -0.1
PCDH1Q08174 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.4□□□□□ -0.1
PCDH1Q08174 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.4□□□□□ -0.1
PCDH1Q08174 AC011495.1-201ENST00000498085 584 ntBASIC14.4□□□□□ -0.1
PCDH1Q08174 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC14.4□□□□□ -0.1
PCDH1Q08174 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDH1Q08174 GNRHR2-203ENST00000581100 1187 ntBASIC14.4□□□□□ -0.1
PCDH1Q08174 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PCDH1Q08174 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
PCDH1Q08174 AC015936.2-201ENST00000593177 259 ntBASIC14.4□□□□□ -0.1
PCDH1Q08174 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDH1Q08174 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.4□□□□□ -0.1
PCDH1Q08174 AP001002.3-201ENST00000623482 206 ntBASIC14.4□□□□□ -0.1
PCDH1Q08174 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.4□□□□□ -0.1
PCDH1Q08174 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.4□□□□□ -0.1
PCDH1Q08174 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
PCDH1Q08174 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
PCDH1Q08174 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDH1Q08174 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC14.4□□□□□ -0.1
PCDH1Q08174 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PCDH1Q08174 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
PCDH1Q08174 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH1Q08174 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH1Q08174 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH1Q08174 TP73-213ENST00000604479 1623 ntTSL 5 BASIC14.4□□□□□ -0.1
PCDH1Q08174 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
PCDH1Q08174 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.4□□□□□ -0.1
PCDH1Q08174 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH1Q08174 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.4□□□□□ -0.1
PCDH1Q08174 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH1Q08174 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH1Q08174 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PCDH1Q08174 MRPL37P1-201ENST00000592451 1337 ntBASIC14.4□□□□□ -0.1
PCDH1Q08174 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.11
PCDH1Q08174 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDH1Q08174 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.39□□□□□ -0.11
PCDH1Q08174 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH1Q08174 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PCDH1Q08174 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.39□□□□□ -0.11
PCDH1Q08174 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC14.39□□□□□ -0.11
PCDH1Q08174 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PCDH1Q08174 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH1Q08174 AC092135.3-201ENST00000624151 1846 ntBASIC14.39□□□□□ -0.11
PCDH1Q08174 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH1Q08174 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH1Q08174 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PCDH1Q08174 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms