Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.17□□□□□ -0.3
UBE2NP61088 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
UBE2NP61088 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC13.17□□□□□ -0.3
UBE2NP61088 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.17□□□□□ -0.3
UBE2NP61088 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.17□□□□□ -0.3
UBE2NP61088 MIR1202-201ENST00000408529 83 ntBASIC13.17□□□□□ -0.3
UBE2NP61088 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.17□□□□□ -0.3
UBE2NP61088 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.17□□□□□ -0.3
UBE2NP61088 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 FAM21FP-201ENST00000426241 1131 ntBASIC13.17□□□□□ -0.3
UBE2NP61088 FAM8A4P-201ENST00000435433 1213 ntBASIC13.17□□□□□ -0.3
UBE2NP61088 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.17□□□□□ -0.3
UBE2NP61088 YBX1P6-201ENST00000442962 1002 ntBASIC13.17□□□□□ -0.3
UBE2NP61088 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC13.17□□□□□ -0.3
UBE2NP61088 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.17□□□□□ -0.3
UBE2NP61088 FTLP10-202ENST00000505798 471 ntBASIC13.17□□□□□ -0.3
UBE2NP61088 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.17□□□□□ -0.3
UBE2NP61088 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.17□□□□□ -0.3
UBE2NP61088 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC13.17□□□□□ -0.3
UBE2NP61088 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.17□□□□□ -0.3
UBE2NP61088 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC13.17□□□□□ -0.3
UBE2NP61088 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.17□□□□□ -0.3
UBE2NP61088 SNX29P1-201ENST00000548357 1007 ntBASIC13.17□□□□□ -0.3
UBE2NP61088 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.17□□□□□ -0.3
UBE2NP61088 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.17□□□□□ -0.3
UBE2NP61088 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.17□□□□□ -0.3
UBE2NP61088 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.17□□□□□ -0.3
UBE2NP61088 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.17□□□□□ -0.3
UBE2NP61088 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.17□□□□□ -0.3
UBE2NP61088 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.17□□□□□ -0.3
UBE2NP61088 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
UBE2NP61088 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC13.17□□□□□ -0.3
UBE2NP61088 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
UBE2NP61088 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
UBE2NP61088 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.17□□□□□ -0.3
UBE2NP61088 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
UBE2NP61088 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
UBE2NP61088 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.17□□□□□ -0.3
UBE2NP61088 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.17□□□□□ -0.3
UBE2NP61088 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
UBE2NP61088 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
UBE2NP61088 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.16□□□□□ -0.3
UBE2NP61088 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
UBE2NP61088 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
UBE2NP61088 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
UBE2NP61088 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
UBE2NP61088 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
UBE2NP61088 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.16□□□□□ -0.3
UBE2NP61088 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.16□□□□□ -0.3
UBE2NP61088 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 AC006001.1-201ENST00000325130 474 ntBASIC13.16□□□□□ -0.3
UBE2NP61088 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2NP61088 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.16□□□□□ -0.3
UBE2NP61088 HLA-V-201ENST00000429037 534 ntBASIC13.16□□□□□ -0.3
UBE2NP61088 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
UBE2NP61088 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.16□□□□□ -0.3
UBE2NP61088 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
UBE2NP61088 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.16□□□□□ -0.3
UBE2NP61088 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
UBE2NP61088 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
UBE2NP61088 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.16□□□□□ -0.3
UBE2NP61088 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms