Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.87□□□□□ -0.35
AP3S2P59780 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
AP3S2P59780 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC12.86□□□□□ -0.35
AP3S2P59780 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
AP3S2P59780 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.86□□□□□ -0.35
AP3S2P59780 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S2P59780 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S2P59780 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
AP3S2P59780 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S2P59780 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.86□□□□□ -0.35
AP3S2P59780 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.86□□□□□ -0.35
AP3S2P59780 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S2P59780 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S2P59780 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S2P59780 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S2P59780 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S2P59780 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S2P59780 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S2P59780 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC12.86□□□□□ -0.35
AP3S2P59780 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S2P59780 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S2P59780 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.86□□□□□ -0.35
AP3S2P59780 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
AP3S2P59780 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
AP3S2P59780 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
AP3S2P59780 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC12.86□□□□□ -0.35
AP3S2P59780 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC12.86□□□□□ -0.35
AP3S2P59780 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
AP3S2P59780 AF186996.4-201ENST00000467186 377 ntBASIC12.86□□□□□ -0.35
AP3S2P59780 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC12.86□□□□□ -0.35
AP3S2P59780 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S2P59780 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.86□□□□□ -0.35
AP3S2P59780 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.86□□□□□ -0.35
AP3S2P59780 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.86□□□□□ -0.35
AP3S2P59780 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S2P59780 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC12.86□□□□□ -0.35
AP3S2P59780 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
AP3S2P59780 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC12.86□□□□□ -0.35
AP3S2P59780 AC068137.2-201ENST00000605408 478 ntBASIC12.86□□□□□ -0.35
AP3S2P59780 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC12.86□□□□□ -0.35
AP3S2P59780 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S2P59780 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.86□□□□□ -0.35
AP3S2P59780 AC068760.1-201ENST00000493579 1953 ntBASIC12.86□□□□□ -0.35
AP3S2P59780 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S2P59780 AL139385.1-201ENST00000611744 3272 ntBASIC12.86□□□□□ -0.35
AP3S2P59780 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S2P59780 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
AP3S2P59780 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.86□□□□□ -0.35
AP3S2P59780 CIC-204ENST00000572681 8218 ntTSL 5 BASIC12.86□□□□□ -0.35
AP3S2P59780 MIR497HG-202ENST00000572453 3838 ntBASIC12.86□□□□□ -0.35
AP3S2P59780 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S2P59780 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S2P59780 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
AP3S2P59780 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S2P59780 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
AP3S2P59780 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
AP3S2P59780 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.86□□□□□ -0.35
AP3S2P59780 BCAR1-209ENST00000546196 1340 ntBASIC12.86□□□□□ -0.35
AP3S2P59780 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC12.86□□□□□ -0.35
AP3S2P59780 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.85□□□□□ -0.35
AP3S2P59780 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC12.85□□□□□ -0.35
AP3S2P59780 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC12.85□□□□□ -0.35
AP3S2P59780 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC12.85□□□□□ -0.35
AP3S2P59780 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.85□□□□□ -0.35
AP3S2P59780 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.85□□□□□ -0.35
AP3S2P59780 AL358334.2-201ENST00000553648 4714 ntTSL 2 BASIC12.85□□□□□ -0.35
AP3S2P59780 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.85□□□□□ -0.35
AP3S2P59780 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
AP3S2P59780 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.85□□□□□ -0.35
AP3S2P59780 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
AP3S2P59780 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
AP3S2P59780 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.85□□□□□ -0.35
AP3S2P59780 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC12.85□□□□□ -0.35
AP3S2P59780 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.85□□□□□ -0.35
AP3S2P59780 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC12.85□□□□□ -0.35
AP3S2P59780 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC12.85□□□□□ -0.35
AP3S2P59780 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
AP3S2P59780 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
AP3S2P59780 USP40-206ENST00000443711 628 ntTSL 2 BASIC12.85□□□□□ -0.35
AP3S2P59780 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
AP3S2P59780 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC12.85□□□□□ -0.35
AP3S2P59780 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.85□□□□□ -0.35
AP3S2P59780 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
AP3S2P59780 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.85□□□□□ -0.35
AP3S2P59780 SAMD11P1-201ENST00000571429 661 ntBASIC12.85□□□□□ -0.35
AP3S2P59780 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.85□□□□□ -0.35
AP3S2P59780 AC004241.5-201ENST00000623870 2448 ntBASIC12.85□□□□□ -0.35
AP3S2P59780 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms