Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
CDH6P55285 AC003102.2-201ENST00000589195 1469 ntBASIC15.56■□□□□ 0.08
CDH6P55285 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH6P55285 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.56■□□□□ 0.08
CDH6P55285 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.56■□□□□ 0.08
CDH6P55285 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
CDH6P55285 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
CDH6P55285 NIN-202ENST00000324330 4364 ntTSL 5 BASIC15.56■□□□□ 0.08
CDH6P55285 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDH6P55285 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.55■□□□□ 0.08
CDH6P55285 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.55■□□□□ 0.08
CDH6P55285 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
CDH6P55285 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CDH6P55285 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDH6P55285 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC15.55■□□□□ 0.08
CDH6P55285 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDH6P55285 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 TPT1P11-201ENST00000458482 498 ntBASIC15.55■□□□□ 0.08
CDH6P55285 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
CDH6P55285 AC022447.6-201ENST00000515522 438 ntBASIC15.55■□□□□ 0.08
CDH6P55285 AC068587.3-201ENST00000526613 355 ntBASIC15.55■□□□□ 0.08
CDH6P55285 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH6P55285 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC15.55■□□□□ 0.08
CDH6P55285 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CDH6P55285 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH6P55285 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.55■□□□□ 0.08
CDH6P55285 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH6P55285 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.55■□□□□ 0.08
CDH6P55285 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CDH6P55285 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
CDH6P55285 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH6P55285 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH6P55285 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDH6P55285 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH6P55285 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH6P55285 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH6P55285 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDH6P55285 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH6P55285 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH6P55285 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH6P55285 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CDH6P55285 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH6P55285 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH6P55285 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH6P55285 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH6P55285 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDH6P55285 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH6P55285 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
CDH6P55285 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH6P55285 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CDH6P55285 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH6P55285 TLE1P1-201ENST00000422965 589 ntBASIC15.54■□□□□ 0.08
CDH6P55285 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.54■□□□□ 0.08
CDH6P55285 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH6P55285 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
CDH6P55285 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH6P55285 TAF8-206ENST00000472818 719 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH6P55285 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH6P55285 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
CDH6P55285 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.54■□□□□ 0.08
CDH6P55285 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC15.54■□□□□ 0.08
CDH6P55285 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC15.54■□□□□ 0.08
CDH6P55285 AL596325.1-201ENST00000563991 1082 ntBASIC15.54■□□□□ 0.08
CDH6P55285 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC15.54■□□□□ 0.08
CDH6P55285 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CDH6P55285 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CDH6P55285 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.54■□□□□ 0.08
CDH6P55285 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH6P55285 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CDH6P55285 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms