Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.61□□□□□ -0.23
HMGA2P52926 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.61□□□□□ -0.23
HMGA2P52926 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
HMGA2P52926 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.6□□□□□ -0.23
HMGA2P52926 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
HMGA2P52926 AC004945.1-201ENST00000416738 983 ntBASIC13.6□□□□□ -0.23
HMGA2P52926 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.6□□□□□ -0.23
HMGA2P52926 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
HMGA2P52926 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.6□□□□□ -0.23
HMGA2P52926 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC13.6□□□□□ -0.23
HMGA2P52926 GCOM2-201ENST00000509133 1104 ntBASIC13.6□□□□□ -0.23
HMGA2P52926 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.6□□□□□ -0.23
HMGA2P52926 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.6□□□□□ -0.23
HMGA2P52926 AC004449.1-201ENST00000564240 433 ntBASIC13.6□□□□□ -0.23
HMGA2P52926 AC120045.2-201ENST00000567334 178 ntBASIC13.6□□□□□ -0.23
HMGA2P52926 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.6□□□□□ -0.23
HMGA2P52926 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC13.6□□□□□ -0.23
HMGA2P52926 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.6□□□□□ -0.23
HMGA2P52926 AC008738.7-201ENST00000609744 511 ntBASIC13.6□□□□□ -0.23
HMGA2P52926 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
HMGA2P52926 AP001002.3-201ENST00000623482 206 ntBASIC13.6□□□□□ -0.23
HMGA2P52926 AC073548.1-201ENST00000624088 1882 ntBASIC13.6□□□□□ -0.23
HMGA2P52926 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
HMGA2P52926 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 PPT1-213ENST00000641319 2388 ntBASIC13.6□□□□□ -0.23
HMGA2P52926 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
HMGA2P52926 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.6□□□□□ -0.23
HMGA2P52926 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC13.6□□□□□ -0.23
HMGA2P52926 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HMGA2P52926 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC13.59□□□□□ -0.23
HMGA2P52926 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
HMGA2P52926 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.59□□□□□ -0.23
HMGA2P52926 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
HMGA2P52926 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 AC139712.1-201ENST00000378256 1875 ntBASIC13.59□□□□□ -0.23
HMGA2P52926 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
HMGA2P52926 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
HMGA2P52926 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.59□□□□□ -0.23
HMGA2P52926 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.59□□□□□ -0.23
HMGA2P52926 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
HMGA2P52926 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.59□□□□□ -0.23
HMGA2P52926 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 KHSRPP1-201ENST00000427983 1768 ntBASIC13.59□□□□□ -0.23
HMGA2P52926 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 RNU1-114P-201ENST00000365297 166 ntBASIC13.59□□□□□ -0.23
HMGA2P52926 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
HMGA2P52926 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.59□□□□□ -0.23
HMGA2P52926 KLF2P2-201ENST00000416807 1039 ntBASIC13.59□□□□□ -0.23
HMGA2P52926 MEP1AP4-201ENST00000423244 1087 ntBASIC13.59□□□□□ -0.23
HMGA2P52926 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
HMGA2P52926 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.59□□□□□ -0.23
HMGA2P52926 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.59□□□□□ -0.23
HMGA2P52926 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.59□□□□□ -0.23
HMGA2P52926 AC004967.1-201ENST00000453589 447 ntBASIC13.59□□□□□ -0.23
HMGA2P52926 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.59□□□□□ -0.23
HMGA2P52926 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
HMGA2P52926 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.59□□□□□ -0.23
HMGA2P52926 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC13.59□□□□□ -0.23
HMGA2P52926 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
HMGA2P52926 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms