Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CDC34P49427 USP40-206ENST00000443711 628 ntTSL 2 BASIC11.87□□□□□ -0.51
CDC34P49427 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC11.87□□□□□ -0.51
CDC34P49427 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC34P49427 AC093909.1-201ENST00000504731 1122 ntBASIC11.87□□□□□ -0.51
CDC34P49427 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC11.87□□□□□ -0.51
CDC34P49427 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC11.87□□□□□ -0.51
CDC34P49427 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC34P49427 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC34P49427 AC106730.1-201ENST00000566722 1090 ntBASIC11.87□□□□□ -0.51
CDC34P49427 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC11.87□□□□□ -0.51
CDC34P49427 TBCB-211ENST00000589996 724 ntTSL 3 BASIC11.87□□□□□ -0.51
CDC34P49427 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC34P49427 AC064836.3-201ENST00000607928 673 ntBASIC11.87□□□□□ -0.51
CDC34P49427 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CDC34P49427 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC11.87□□□□□ -0.51
CDC34P49427 AC116407.3-201ENST00000623905 1129 ntBASIC11.87□□□□□ -0.51
CDC34P49427 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CDC34P49427 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC34P49427 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC11.87□□□□□ -0.51
CDC34P49427 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC34P49427 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CDC34P49427 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CDC34P49427 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC34P49427 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC34P49427 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC34P49427 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC34P49427 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC34P49427 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
CDC34P49427 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC11.87□□□□□ -0.51
CDC34P49427 Z82170.1-201ENST00000625081 3192 ntBASIC11.87□□□□□ -0.51
CDC34P49427 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CDC34P49427 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
CDC34P49427 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC11.86□□□□□ -0.51
CDC34P49427 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC11.86□□□□□ -0.51
CDC34P49427 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC11.86□□□□□ -0.51
CDC34P49427 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC11.86□□□□□ -0.51
CDC34P49427 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC11.86□□□□□ -0.51
CDC34P49427 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC11.86□□□□□ -0.51
CDC34P49427 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC11.86□□□□□ -0.51
CDC34P49427 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 PES1-204ENST00000402284 2144 ntTSL 5 BASIC11.86□□□□□ -0.51
CDC34P49427 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CDC34P49427 BCL2L11-221ENST00000621302 5224 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CDC34P49427 BCL2L11-222ENST00000622509 5231 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CDC34P49427 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC11.86□□□□□ -0.51
CDC34P49427 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CDC34P49427 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
CDC34P49427 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CDC34P49427 MIR346-201ENST00000362234 95 ntBASIC11.86□□□□□ -0.51
CDC34P49427 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.86□□□□□ -0.51
CDC34P49427 AL031284.1-201ENST00000419297 478 ntBASIC11.86□□□□□ -0.51
CDC34P49427 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC11.86□□□□□ -0.51
CDC34P49427 IGHV3-62-201ENST00000520057 340 ntBASIC11.86□□□□□ -0.51
CDC34P49427 FAM86C2P-203ENST00000528684 1004 ntBASIC11.86□□□□□ -0.51
CDC34P49427 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.86□□□□□ -0.51
CDC34P49427 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC11.86□□□□□ -0.51
CDC34P49427 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CDC34P49427 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 RNF34-208ENST00000555076 593 ntTSL 3 BASIC11.86□□□□□ -0.51
CDC34P49427 INO80E-210ENST00000567705 880 ntTSL 3 BASIC11.86□□□□□ -0.51
CDC34P49427 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC11.86□□□□□ -0.51
CDC34P49427 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC11.86□□□□□ -0.51
CDC34P49427 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC11.86□□□□□ -0.51
CDC34P49427 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC11.86□□□□□ -0.51
CDC34P49427 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC11.86□□□□□ -0.51
CDC34P49427 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC11.86□□□□□ -0.51
CDC34P49427 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC11.86□□□□□ -0.51
CDC34P49427 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 CACNA1C-209ENST00000399603 7377 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CDC34P49427 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC11.86□□□□□ -0.51
CDC34P49427 AP3S2-216ENST00000617003 1561 ntBASIC11.86□□□□□ -0.51
CDC34P49427 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC11.86□□□□□ -0.51
CDC34P49427 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 AC073548.1-201ENST00000624088 1882 ntBASIC11.86□□□□□ -0.51
CDC34P49427 AL591122.2-201ENST00000624125 1853 ntBASIC11.86□□□□□ -0.51
CDC34P49427 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC11.86□□□□□ -0.51
CDC34P49427 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC11.86□□□□□ -0.51
CDC34P49427 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC11.86□□□□□ -0.51
CDC34P49427 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CDC34P49427 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms