Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 AL358472.5-202ENST00000641448 1267 ntBASIC15.56■□□□□ 0.08
MMP13P45452 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP13P45452 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC15.56■□□□□ 0.08
MMP13P45452 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP13P45452 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MMP13P45452 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
MMP13P45452 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
MMP13P45452 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP13P45452 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.56■□□□□ 0.08
MMP13P45452 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP13P45452 PES1-204ENST00000402284 2144 ntTSL 5 BASIC15.56■□□□□ 0.08
MMP13P45452 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MMP13P45452 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
MMP13P45452 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.56■□□□□ 0.08
MMP13P45452 CICP20-201ENST00000443330 2801 ntBASIC15.56■□□□□ 0.08
MMP13P45452 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
MMP13P45452 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
MMP13P45452 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.56■□□□□ 0.08
MMP13P45452 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP13P45452 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP13P45452 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP13P45452 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
MMP13P45452 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP13P45452 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
MMP13P45452 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP13P45452 AL157414.3-201ENST00000624276 1954 ntBASIC15.55■□□□□ 0.08
MMP13P45452 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
MMP13P45452 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.55■□□□□ 0.08
MMP13P45452 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.55■□□□□ 0.08
MMP13P45452 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.55■□□□□ 0.08
MMP13P45452 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
MMP13P45452 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
MMP13P45452 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP13P45452 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP13P45452 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP13P45452 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MMP13P45452 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
MMP13P45452 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP13P45452 RNU1-114P-201ENST00000365297 166 ntBASIC15.55■□□□□ 0.08
MMP13P45452 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC15.55■□□□□ 0.08
MMP13P45452 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
MMP13P45452 AL035633.1-201ENST00000406139 838 ntBASIC15.55■□□□□ 0.08
MMP13P45452 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.55■□□□□ 0.08
MMP13P45452 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
MMP13P45452 AC011495.1-201ENST00000498085 584 ntBASIC15.55■□□□□ 0.08
MMP13P45452 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.55■□□□□ 0.08
MMP13P45452 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC15.55■□□□□ 0.08
MMP13P45452 NEU3-203ENST00000529024 581 ntTSL 3 BASIC15.55■□□□□ 0.08
MMP13P45452 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.55■□□□□ 0.08
MMP13P45452 AL596325.1-201ENST00000563991 1082 ntBASIC15.55■□□□□ 0.08
MMP13P45452 AP001063.1-201ENST00000568332 529 ntBASIC15.55■□□□□ 0.08
MMP13P45452 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.55■□□□□ 0.08
MMP13P45452 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
MMP13P45452 PRSS30P-206ENST00000641773 873 ntBASIC15.55■□□□□ 0.08
MMP13P45452 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP13P45452 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP13P45452 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
MMP13P45452 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP13P45452 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP13P45452 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
MMP13P45452 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.55■□□□□ 0.08
MMP13P45452 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP13P45452 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP13P45452 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MMP13P45452 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MMP13P45452 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP13P45452 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MMP13P45452 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
MMP13P45452 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
MMP13P45452 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MMP13P45452 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP13P45452 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC15.54■□□□□ 0.08
MMP13P45452 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.54■□□□□ 0.08
MMP13P45452 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC15.54■□□□□ 0.08
MMP13P45452 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP13P45452 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.54■□□□□ 0.08
MMP13P45452 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.54■□□□□ 0.08
MMP13P45452 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.54■□□□□ 0.08
MMP13P45452 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP13P45452 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP13P45452 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP13P45452 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP13P45452 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP13P45452 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP13P45452 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP13P45452 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP13P45452 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP13P45452 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.54■□□□□ 0.08
MMP13P45452 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.54■□□□□ 0.08
MMP13P45452 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
MMP13P45452 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.54■□□□□ 0.08
MMP13P45452 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
MMP13P45452 AL139094.1-201ENST00000405549 1188 ntBASIC15.54■□□□□ 0.08
MMP13P45452 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
MMP13P45452 COX20P2-201ENST00000452636 358 ntBASIC15.54■□□□□ 0.08
MMP13P45452 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.54■□□□□ 0.08
MMP13P45452 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
MMP13P45452 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MMP13P45452 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MMP13P45452 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms