Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PDE6BP35913 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE6BP35913 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6BP35913 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE6BP35913 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
PDE6BP35913 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6BP35913 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6BP35913 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
PDE6BP35913 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6BP35913 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PDE6BP35913 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6BP35913 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC18.15■□□□□ 0.5
PDE6BP35913 IDS-203ENST00000428056 1213 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE6BP35913 PSMD4P1-201ENST00000433951 1109 ntBASIC18.15■□□□□ 0.5
PDE6BP35913 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE6BP35913 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PDE6BP35913 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC18.15■□□□□ 0.5
PDE6BP35913 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC18.15■□□□□ 0.5
PDE6BP35913 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC18.15■□□□□ 0.5
PDE6BP35913 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE6BP35913 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE6BP35913 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6BP35913 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6BP35913 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE6BP35913 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6BP35913 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6BP35913 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
PDE6BP35913 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6BP35913 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6BP35913 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6BP35913 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
PDE6BP35913 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6BP35913 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6BP35913 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6BP35913 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.15■□□□□ 0.5
PDE6BP35913 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
PDE6BP35913 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
PDE6BP35913 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PDE6BP35913 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC18.14■□□□□ 0.5
PDE6BP35913 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.5
PDE6BP35913 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
PDE6BP35913 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.5
PDE6BP35913 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.14■□□□□ 0.49
PDE6BP35913 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC18.14■□□□□ 0.49
PDE6BP35913 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.14■□□□□ 0.49
PDE6BP35913 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
PDE6BP35913 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6BP35913 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6BP35913 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC18.14■□□□□ 0.49
PDE6BP35913 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PDE6BP35913 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PDE6BP35913 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC18.14■□□□□ 0.49
PDE6BP35913 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC18.14■□□□□ 0.49
PDE6BP35913 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC18.14■□□□□ 0.49
PDE6BP35913 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC18.14■□□□□ 0.49
PDE6BP35913 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6BP35913 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6BP35913 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC18.14■□□□□ 0.49
PDE6BP35913 RPS23-204ENST00000507980 836 ntTSL 2 BASIC18.14■□□□□ 0.49
PDE6BP35913 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC18.14■□□□□ 0.49
PDE6BP35913 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC18.14■□□□□ 0.49
PDE6BP35913 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC18.14■□□□□ 0.49
PDE6BP35913 AC005041.3-201ENST00000606287 649 ntBASIC18.14■□□□□ 0.49
PDE6BP35913 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6BP35913 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
PDE6BP35913 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6BP35913 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6BP35913 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6BP35913 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6BP35913 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6BP35913 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
PDE6BP35913 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC18.14■□□□□ 0.49
PDE6BP35913 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.14■□□□□ 0.49
PDE6BP35913 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC18.14■□□□□ 0.49
PDE6BP35913 MOGAT2-201ENST00000198801 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6BP35913 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
PDE6BP35913 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6BP35913 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PDE6BP35913 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC18.14■□□□□ 0.49
PDE6BP35913 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6BP35913 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC18.13■□□□□ 0.49
PDE6BP35913 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC18.13■□□□□ 0.49
PDE6BP35913 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6BP35913 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6BP35913 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6BP35913 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6BP35913 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC18.13■□□□□ 0.49
PDE6BP35913 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PDE6BP35913 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6BP35913 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6BP35913 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
PDE6BP35913 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
PDE6BP35913 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC18.13■□□□□ 0.49
PDE6BP35913 GUSBP10-201ENST00000417412 665 ntBASIC18.13■□□□□ 0.49
PDE6BP35913 POLR2H-203ENST00000430783 1159 ntTSL 2 BASIC18.13■□□□□ 0.49
PDE6BP35913 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC18.13■□□□□ 0.49
PDE6BP35913 DPY19L2P5-201ENST00000456300 331 ntBASIC18.13■□□□□ 0.49
PDE6BP35913 AC024293.1-201ENST00000467930 498 ntBASIC18.13■□□□□ 0.49
PDE6BP35913 RNA5SP417-201ENST00000516459 108 ntBASIC18.13■□□□□ 0.49
PDE6BP35913 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms