Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC138028.6-201ENST00000616106 1482 ntBASIC16.92■□□□□ 0.3
HOXA13P31271 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA13P31271 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXA13P31271 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA13P31271 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
HOXA13P31271 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.92■□□□□ 0.3
HOXA13P31271 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
HOXA13P31271 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA13P31271 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA13P31271 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HOXA13P31271 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXA13P31271 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA13P31271 AL136172.1-201ENST00000598590 1394 ntBASIC16.91■□□□□ 0.3
HOXA13P31271 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
HOXA13P31271 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA13P31271 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
HOXA13P31271 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA13P31271 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA13P31271 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
HOXA13P31271 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
HOXA13P31271 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA13P31271 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXA13P31271 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA13P31271 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.91■□□□□ 0.3
HOXA13P31271 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.91■□□□□ 0.3
HOXA13P31271 DPM3-202ENST00000368399 517 ntBASIC16.91■□□□□ 0.3
HOXA13P31271 AC016700.1-201ENST00000429424 312 ntBASIC16.91■□□□□ 0.3
HOXA13P31271 CALR4P-201ENST00000431943 946 ntBASIC16.91■□□□□ 0.3
HOXA13P31271 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA13P31271 RPL18P13-201ENST00000478088 569 ntBASIC16.91■□□□□ 0.3
HOXA13P31271 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.91■□□□□ 0.3
HOXA13P31271 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC16.91■□□□□ 0.3
HOXA13P31271 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.91■□□□□ 0.3
HOXA13P31271 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA13P31271 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA13P31271 AC008825.2-201ENST00000603374 718 ntBASIC16.91■□□□□ 0.3
HOXA13P31271 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.91■□□□□ 0.3
HOXA13P31271 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.91■□□□□ 0.3
HOXA13P31271 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA13P31271 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
HOXA13P31271 AMT-239ENST00000636865 1914 ntTSL 5 BASIC16.91■□□□□ 0.3
HOXA13P31271 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA13P31271 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
HOXA13P31271 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA13P31271 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA13P31271 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.91■□□□□ 0.3
HOXA13P31271 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA13P31271 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
HOXA13P31271 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA13P31271 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
HOXA13P31271 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXA13P31271 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC16.9■□□□□ 0.3
HOXA13P31271 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HOXA13P31271 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC16.9■□□□□ 0.3
HOXA13P31271 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.9■□□□□ 0.3
HOXA13P31271 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC16.9■□□□□ 0.3
HOXA13P31271 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HOXA13P31271 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
HOXA13P31271 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXA13P31271 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXA13P31271 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 EIF4HP1-201ENST00000453115 687 ntBASIC16.9■□□□□ 0.3
HOXA13P31271 TUBB8P8-201ENST00000458717 1058 ntBASIC16.9■□□□□ 0.3
HOXA13P31271 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXA13P31271 AC005740.2-201ENST00000511085 419 ntBASIC16.9■□□□□ 0.3
HOXA13P31271 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXA13P31271 AC005324.6-201ENST00000587972 613 ntBASIC16.9■□□□□ 0.3
HOXA13P31271 AC027601.3-201ENST00000622907 509 ntBASIC16.9■□□□□ 0.3
HOXA13P31271 AC004923.1-202ENST00000642106 209 ntBASIC16.9■□□□□ 0.3
HOXA13P31271 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXA13P31271 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC16.9■□□□□ 0.3
HOXA13P31271 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
HOXA13P31271 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.9■□□□□ 0.3
HOXA13P31271 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 CRLF2-201ENST00000381566 1545 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
HOXA13P31271 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
HOXA13P31271 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
HOXA13P31271 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms