Protein–RNA interactions for Protein: P28562

DUSP1, Dual specificity protein phosphatase 1, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP1P28562 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.83□□□□□ -0.36
DUSP1P28562 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
DUSP1P28562 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
DUSP1P28562 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DUSP1P28562 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
DUSP1P28562 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
DUSP1P28562 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DUSP1P28562 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DUSP1P28562 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DUSP1P28562 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DUSP1P28562 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
DUSP1P28562 AC027601.5-201ENST00000624065 2482 ntBASIC12.83□□□□□ -0.36
DUSP1P28562 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
DUSP1P28562 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
DUSP1P28562 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.83□□□□□ -0.36
DUSP1P28562 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
DUSP1P28562 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
DUSP1P28562 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DUSP1P28562 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC12.83□□□□□ -0.36
DUSP1P28562 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
DUSP1P28562 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
DUSP1P28562 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.82□□□□□ -0.36
DUSP1P28562 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
DUSP1P28562 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
DUSP1P28562 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
DUSP1P28562 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.82□□□□□ -0.36
DUSP1P28562 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC12.82□□□□□ -0.36
DUSP1P28562 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
DUSP1P28562 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 MIR770-201ENST00000390219 98 ntBASIC12.82□□□□□ -0.36
DUSP1P28562 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.82□□□□□ -0.36
DUSP1P28562 HLA-K-203ENST00000430151 1046 ntBASIC12.82□□□□□ -0.36
DUSP1P28562 SERBP1P5-201ENST00000510079 1181 ntBASIC12.82□□□□□ -0.36
DUSP1P28562 AC104596.2-201ENST00000512793 793 ntBASIC12.82□□□□□ -0.36
DUSP1P28562 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC12.82□□□□□ -0.36
DUSP1P28562 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.82□□□□□ -0.36
DUSP1P28562 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.82□□□□□ -0.36
DUSP1P28562 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC12.82□□□□□ -0.36
DUSP1P28562 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC12.82□□□□□ -0.36
DUSP1P28562 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.82□□□□□ -0.36
DUSP1P28562 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.82□□□□□ -0.36
DUSP1P28562 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC12.82□□□□□ -0.36
DUSP1P28562 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC12.82□□□□□ -0.36
DUSP1P28562 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC12.82□□□□□ -0.36
DUSP1P28562 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
DUSP1P28562 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
DUSP1P28562 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
DUSP1P28562 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 AC093525.8-201ENST00000624099 1342 ntBASIC12.82□□□□□ -0.36
DUSP1P28562 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
DUSP1P28562 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC12.82□□□□□ -0.36
DUSP1P28562 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.82□□□□□ -0.36
DUSP1P28562 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
DUSP1P28562 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
DUSP1P28562 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
DUSP1P28562 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
DUSP1P28562 SLC7A15P-201ENST00000424028 1363 ntBASIC12.81□□□□□ -0.36
DUSP1P28562 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUSP1P28562 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DUSP1P28562 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.81□□□□□ -0.36
DUSP1P28562 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUSP1P28562 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUSP1P28562 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUSP1P28562 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.81□□□□□ -0.36
DUSP1P28562 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUSP1P28562 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUSP1P28562 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
DUSP1P28562 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUSP1P28562 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC12.81□□□□□ -0.36
DUSP1P28562 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUSP1P28562 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
DUSP1P28562 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
DUSP1P28562 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
DUSP1P28562 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
DUSP1P28562 AC007541.1-201ENST00000570282 1469 ntBASIC12.81□□□□□ -0.36
DUSP1P28562 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DUSP1P28562 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
DUSP1P28562 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms