Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ABCD3P28288 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ABCD3P28288 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
ABCD3P28288 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ABCD3P28288 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ABCD3P28288 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ABCD3P28288 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ABCD3P28288 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.77□□□□□ -0.21
ABCD3P28288 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.77□□□□□ -0.21
ABCD3P28288 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ABCD3P28288 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.77□□□□□ -0.21
ABCD3P28288 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ABCD3P28288 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC13.77□□□□□ -0.21
ABCD3P28288 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ABCD3P28288 CNN2P10-201ENST00000443067 918 ntBASIC13.77□□□□□ -0.21
ABCD3P28288 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ABCD3P28288 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ABCD3P28288 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ABCD3P28288 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ABCD3P28288 BNIP3P42-201ENST00000454982 569 ntBASIC13.77□□□□□ -0.21
ABCD3P28288 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.77□□□□□ -0.21
ABCD3P28288 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.77□□□□□ -0.21
ABCD3P28288 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
ABCD3P28288 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC13.77□□□□□ -0.21
ABCD3P28288 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC13.77□□□□□ -0.21
ABCD3P28288 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.77□□□□□ -0.21
ABCD3P28288 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ABCD3P28288 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.77□□□□□ -0.21
ABCD3P28288 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.77□□□□□ -0.21
ABCD3P28288 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC13.77□□□□□ -0.21
ABCD3P28288 NAA38-206ENST00000576384 424 ntTSL 2 BASIC13.77□□□□□ -0.21
ABCD3P28288 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.77□□□□□ -0.21
ABCD3P28288 BNIP3P29-201ENST00000598302 571 ntBASIC13.77□□□□□ -0.21
ABCD3P28288 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
ABCD3P28288 AC011447.5-201ENST00000616168 564 ntBASIC13.77□□□□□ -0.21
ABCD3P28288 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ABCD3P28288 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC13.77□□□□□ -0.21
ABCD3P28288 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC13.77□□□□□ -0.21
ABCD3P28288 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ABCD3P28288 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
ABCD3P28288 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ABCD3P28288 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ABCD3P28288 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.77□□□□□ -0.21
ABCD3P28288 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
ABCD3P28288 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
ABCD3P28288 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.76□□□□□ -0.21
ABCD3P28288 AC009093.2-202ENST00000620513 2079 ntBASIC13.76□□□□□ -0.21
ABCD3P28288 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.76□□□□□ -0.21
ABCD3P28288 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 AC004945.1-201ENST00000416738 983 ntBASIC13.76□□□□□ -0.21
ABCD3P28288 FAM21FP-201ENST00000426241 1131 ntBASIC13.76□□□□□ -0.21
ABCD3P28288 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC13.76□□□□□ -0.21
ABCD3P28288 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.76□□□□□ -0.21
ABCD3P28288 DUX4L45-201ENST00000566406 1057 ntBASIC13.76□□□□□ -0.21
ABCD3P28288 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.76□□□□□ -0.21
ABCD3P28288 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC13.76□□□□□ -0.21
ABCD3P28288 ZACNP1-201ENST00000612259 710 ntBASIC13.76□□□□□ -0.21
ABCD3P28288 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.76□□□□□ -0.21
ABCD3P28288 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
ABCD3P28288 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.76□□□□□ -0.21
ABCD3P28288 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.76□□□□□ -0.21
ABCD3P28288 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
ABCD3P28288 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.76□□□□□ -0.21
ABCD3P28288 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
ABCD3P28288 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ABCD3P28288 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
ABCD3P28288 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC13.75□□□□□ -0.21
ABCD3P28288 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ABCD3P28288 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.75□□□□□ -0.21
ABCD3P28288 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
ABCD3P28288 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
ABCD3P28288 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
ABCD3P28288 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.75□□□□□ -0.21
ABCD3P28288 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
ABCD3P28288 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.75□□□□□ -0.21
ABCD3P28288 KRT8P4-201ENST00000509735 1454 ntBASIC13.75□□□□□ -0.21
ABCD3P28288 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms