Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 MBLAC2-202ENST00000514906 1936 ntBASIC12.82□□□□□ -0.36
CCL1P22362 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL1P22362 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL1P22362 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
CCL1P22362 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL1P22362 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.82□□□□□ -0.36
CCL1P22362 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.82□□□□□ -0.36
CCL1P22362 TSPY16P-201ENST00000449843 468 ntBASIC12.82□□□□□ -0.36
CCL1P22362 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC12.82□□□□□ -0.36
CCL1P22362 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL1P22362 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.82□□□□□ -0.36
CCL1P22362 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.82□□□□□ -0.36
CCL1P22362 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CCL1P22362 AC138466.3-201ENST00000619983 221 ntBASIC12.82□□□□□ -0.36
CCL1P22362 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.82□□□□□ -0.36
CCL1P22362 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CCL1P22362 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL1P22362 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.82□□□□□ -0.36
CCL1P22362 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CCL1P22362 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CCL1P22362 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.82□□□□□ -0.36
CCL1P22362 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC12.82□□□□□ -0.36
CCL1P22362 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CCL1P22362 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CCL1P22362 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
CCL1P22362 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCL1P22362 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL1P22362 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CCL1P22362 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC12.81□□□□□ -0.36
CCL1P22362 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
CCL1P22362 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CCL1P22362 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.81□□□□□ -0.36
CCL1P22362 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL1P22362 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC12.81□□□□□ -0.36
CCL1P22362 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.81□□□□□ -0.36
CCL1P22362 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CCL1P22362 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCL1P22362 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCL1P22362 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.81□□□□□ -0.36
CCL1P22362 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.81□□□□□ -0.36
CCL1P22362 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL1P22362 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CCL1P22362 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCL1P22362 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.81□□□□□ -0.36
CCL1P22362 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCL1P22362 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL1P22362 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL1P22362 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL1P22362 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL1P22362 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL1P22362 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL1P22362 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CCL1P22362 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL1P22362 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCL1P22362 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CCL1P22362 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
CCL1P22362 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
CCL1P22362 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
CCL1P22362 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC12.81□□□□□ -0.36
CCL1P22362 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.81□□□□□ -0.36
CCL1P22362 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.81□□□□□ -0.36
CCL1P22362 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC12.81□□□□□ -0.36
CCL1P22362 RN7SL48P-201ENST00000579283 293 ntBASIC12.81□□□□□ -0.36
CCL1P22362 AC008494.3-201ENST00000606615 944 ntBASIC12.81□□□□□ -0.36
CCL1P22362 ENPP7P14-201ENST00000621765 1040 ntBASIC12.81□□□□□ -0.36
CCL1P22362 ABBA01031660.1-201ENST00000635219 756 ntBASIC12.81□□□□□ -0.36
CCL1P22362 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.81□□□□□ -0.36
CCL1P22362 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
CCL1P22362 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
CCL1P22362 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
CCL1P22362 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL1P22362 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CCL1P22362 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL1P22362 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC12.81□□□□□ -0.36
CCL1P22362 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CCL1P22362 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC12.81□□□□□ -0.36
CCL1P22362 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms