Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.43□□□□□ -0.1
CAPN3P20807 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN3P20807 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CAPN3P20807 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CAPN3P20807 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN3P20807 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN3P20807 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN3P20807 AC087499.6-201ENST00000411576 835 ntBASIC14.43□□□□□ -0.1
CAPN3P20807 AP006294.1-201ENST00000415407 339 ntBASIC14.43□□□□□ -0.1
CAPN3P20807 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC14.43□□□□□ -0.1
CAPN3P20807 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.43□□□□□ -0.1
CAPN3P20807 SDHAP3-202ENST00000515467 728 ntBASIC14.43□□□□□ -0.1
CAPN3P20807 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.43□□□□□ -0.1
CAPN3P20807 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC14.43□□□□□ -0.1
CAPN3P20807 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.43□□□□□ -0.1
CAPN3P20807 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.43□□□□□ -0.1
CAPN3P20807 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.43□□□□□ -0.1
CAPN3P20807 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN3P20807 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.43□□□□□ -0.1
CAPN3P20807 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC14.43□□□□□ -0.1
CAPN3P20807 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.43□□□□□ -0.1
CAPN3P20807 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN3P20807 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
CAPN3P20807 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.43□□□□□ -0.1
CAPN3P20807 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.43□□□□□ -0.1
CAPN3P20807 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN3P20807 AL391825.1-201ENST00000457671 1364 ntBASIC14.43□□□□□ -0.1
CAPN3P20807 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CAPN3P20807 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.43□□□□□ -0.1
CAPN3P20807 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CAPN3P20807 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
CAPN3P20807 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN3P20807 AC007541.1-201ENST00000570282 1469 ntBASIC14.43□□□□□ -0.1
CAPN3P20807 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN3P20807 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
CAPN3P20807 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.43□□□□□ -0.1
CAPN3P20807 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN3P20807 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN3P20807 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CAPN3P20807 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC14.42□□□□□ -0.1
CAPN3P20807 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN3P20807 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN3P20807 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.42□□□□□ -0.1
CAPN3P20807 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.42□□□□□ -0.1
CAPN3P20807 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.42□□□□□ -0.1
CAPN3P20807 AC012617.1-204ENST00000586340 2305 ntBASIC14.42□□□□□ -0.1
CAPN3P20807 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN3P20807 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
CAPN3P20807 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN3P20807 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CAPN3P20807 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN3P20807 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN3P20807 AC097376.2-205ENST00000610159 5334 ntBASIC14.42□□□□□ -0.1
CAPN3P20807 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.42□□□□□ -0.1
CAPN3P20807 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN3P20807 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
CAPN3P20807 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN3P20807 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN3P20807 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.42□□□□□ -0.1
CAPN3P20807 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.42□□□□□ -0.1
CAPN3P20807 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN3P20807 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14.42□□□□□ -0.1
CAPN3P20807 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.42□□□□□ -0.1
CAPN3P20807 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN3P20807 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN3P20807 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN3P20807 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN3P20807 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.42□□□□□ -0.1
CAPN3P20807 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN3P20807 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CAPN3P20807 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN3P20807 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
CAPN3P20807 ADK-205ENST00000539909 1866 ntTSL 2 BASIC14.42□□□□□ -0.1
CAPN3P20807 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC14.42□□□□□ -0.1
CAPN3P20807 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN3P20807 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
CAPN3P20807 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
CAPN3P20807 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 AC093525.8-201ENST00000624099 1342 ntBASIC14.41□□□□□ -0.1
CAPN3P20807 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC14.41□□□□□ -0.1
CAPN3P20807 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.41□□□□□ -0.1
CAPN3P20807 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.41□□□□□ -0.1
CAPN3P20807 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.41□□□□□ -0.1
CAPN3P20807 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC14.41□□□□□ -0.1
CAPN3P20807 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.41□□□□□ -0.1
CAPN3P20807 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CAPN3P20807 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms