Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CXCL3P19876 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CXCL3P19876 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CXCL3P19876 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC12.55□□□□□ -0.4
CXCL3P19876 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
CXCL3P19876 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC12.55□□□□□ -0.4
CXCL3P19876 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CXCL3P19876 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CXCL3P19876 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CXCL3P19876 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC12.55□□□□□ -0.4
CXCL3P19876 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
CXCL3P19876 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CXCL3P19876 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.55□□□□□ -0.4
CXCL3P19876 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CXCL3P19876 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
CXCL3P19876 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
CXCL3P19876 NLRP2-204ENST00000391721 3420 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
CXCL3P19876 AL031595.1-201ENST00000623969 4709 ntBASIC12.54□□□□□ -0.4
CXCL3P19876 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CXCL3P19876 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.54□□□□□ -0.4
CXCL3P19876 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CXCL3P19876 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CXCL3P19876 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CXCL3P19876 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CXCL3P19876 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CXCL3P19876 CLK3P2-201ENST00000427566 1453 ntBASIC12.54□□□□□ -0.4
CXCL3P19876 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CXCL3P19876 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CXCL3P19876 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
CXCL3P19876 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC12.54□□□□□ -0.4
CXCL3P19876 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CXCL3P19876 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.54□□□□□ -0.4
CXCL3P19876 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CXCL3P19876 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CXCL3P19876 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CXCL3P19876 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
CXCL3P19876 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
CXCL3P19876 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CXCL3P19876 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CXCL3P19876 RPS2P1-201ENST00000434010 821 ntBASIC12.54□□□□□ -0.4
CXCL3P19876 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.54□□□□□ -0.4
CXCL3P19876 AC073648.2-201ENST00000510116 352 ntBASIC12.54□□□□□ -0.4
CXCL3P19876 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.54□□□□□ -0.4
CXCL3P19876 SDHD-206ENST00000528182 754 ntTSL 3 BASIC12.54□□□□□ -0.4
CXCL3P19876 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CXCL3P19876 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CXCL3P19876 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC12.54□□□□□ -0.4
CXCL3P19876 AL138918.1-201ENST00000568306 659 ntBASIC12.54□□□□□ -0.4
CXCL3P19876 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC12.54□□□□□ -0.4
CXCL3P19876 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC12.54□□□□□ -0.4
CXCL3P19876 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
CXCL3P19876 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC12.54□□□□□ -0.4
CXCL3P19876 AC073389.1-201ENST00000595595 795 ntBASIC12.54□□□□□ -0.4
CXCL3P19876 IFNL4P1-201ENST00000607083 540 ntBASIC12.54□□□□□ -0.4
CXCL3P19876 MIR1199-201ENST00000621445 119 ntBASIC12.54□□□□□ -0.4
CXCL3P19876 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC12.54□□□□□ -0.4
CXCL3P19876 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
CXCL3P19876 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
CXCL3P19876 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
CXCL3P19876 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CXCL3P19876 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CXCL3P19876 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.54□□□□□ -0.4
CXCL3P19876 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.54□□□□□ -0.4
CXCL3P19876 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.54□□□□□ -0.4
CXCL3P19876 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CXCL3P19876 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CXCL3P19876 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
CXCL3P19876 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.54□□□□□ -0.4
CXCL3P19876 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC12.54□□□□□ -0.4
CXCL3P19876 BX324167.2-201ENST00000623717 3316 ntBASIC12.54□□□□□ -0.4
CXCL3P19876 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CXCL3P19876 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.53□□□□□ -0.4
CXCL3P19876 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
CXCL3P19876 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CXCL3P19876 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CXCL3P19876 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC12.53□□□□□ -0.4
CXCL3P19876 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
CXCL3P19876 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
CXCL3P19876 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC12.53□□□□□ -0.4
CXCL3P19876 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC12.53□□□□□ -0.4
CXCL3P19876 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.53□□□□□ -0.4
CXCL3P19876 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.53□□□□□ -0.4
CXCL3P19876 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
CXCL3P19876 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
CXCL3P19876 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.53□□□□□ -0.4
CXCL3P19876 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
CXCL3P19876 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms