Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HNRNPCL4P0DMR1 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HNRNPCL4P0DMR1 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
HNRNPCL4P0DMR1 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.93□□□□□ -0.18
HNRNPCL4P0DMR1 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HNRNPCL4P0DMR1 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HNRNPCL4P0DMR1 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HNRNPCL4P0DMR1 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.93□□□□□ -0.18
HNRNPCL4P0DMR1 AC152010.1-201ENST00000415779 2006 ntBASIC13.93□□□□□ -0.18
HNRNPCL4P0DMR1 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HNRNPCL4P0DMR1 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HNRNPCL4P0DMR1 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC13.93□□□□□ -0.18
HNRNPCL4P0DMR1 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HNRNPCL4P0DMR1 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HNRNPCL4P0DMR1 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 LRRC59-203ENST00000576448 1531 ntBASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 ACKR1-201ENST00000368121 1240 ntBASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 PMS2P2-201ENST00000425039 1128 ntBASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 ENPP7P5-201ENST00000541031 1031 ntBASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HNRNPCL4P0DMR1 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.91□□□□□ -0.18
HNRNPCL4P0DMR1 AL137784.3-201ENST00000623858 2288 ntBASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms