Protein–RNA interactions for Protein: P09496

CLTA, Clathrin light chain A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTAP09496 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.38■□□□□ 0.21
CLTAP09496 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC16.38■□□□□ 0.21
CLTAP09496 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CLTAP09496 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLTAP09496 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC16.38■□□□□ 0.21
CLTAP09496 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLTAP09496 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLTAP09496 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLTAP09496 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.38■□□□□ 0.21
CLTAP09496 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CLTAP09496 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLTAP09496 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CLTAP09496 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLTAP09496 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLTAP09496 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLTAP09496 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLTAP09496 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.38■□□□□ 0.21
CLTAP09496 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.38■□□□□ 0.21
CLTAP09496 FTLP10-202ENST00000505798 471 ntBASIC16.38■□□□□ 0.21
CLTAP09496 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.38■□□□□ 0.21
CLTAP09496 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC16.38■□□□□ 0.21
CLTAP09496 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CLTAP09496 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC16.38■□□□□ 0.21
CLTAP09496 DUX4L45-201ENST00000566406 1057 ntBASIC16.38■□□□□ 0.21
CLTAP09496 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.38■□□□□ 0.21
CLTAP09496 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLTAP09496 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLTAP09496 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLTAP09496 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC16.38■□□□□ 0.21
CLTAP09496 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLTAP09496 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC16.38■□□□□ 0.21
CLTAP09496 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
CLTAP09496 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC16.38■□□□□ 0.21
CLTAP09496 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.38■□□□□ 0.21
CLTAP09496 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLTAP09496 AJ011931.1-201ENST00000618749 2492 ntBASIC16.38■□□□□ 0.21
CLTAP09496 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC16.38■□□□□ 0.21
CLTAP09496 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.38■□□□□ 0.21
CLTAP09496 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CLTAP09496 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CLTAP09496 AC097376.2-205ENST00000610159 5334 ntBASIC16.38■□□□□ 0.21
CLTAP09496 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.37■□□□□ 0.21
CLTAP09496 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLTAP09496 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLTAP09496 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLTAP09496 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLTAP09496 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLTAP09496 MYO15B-237ENST00000642007 4893 ntBASIC16.37■□□□□ 0.21
CLTAP09496 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLTAP09496 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.37■□□□□ 0.21
CLTAP09496 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.37■□□□□ 0.21
CLTAP09496 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLTAP09496 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLTAP09496 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLTAP09496 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLTAP09496 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLTAP09496 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLTAP09496 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC16.37■□□□□ 0.21
CLTAP09496 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
CLTAP09496 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLTAP09496 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC16.37■□□□□ 0.21
CLTAP09496 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.37■□□□□ 0.21
CLTAP09496 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLTAP09496 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.37■□□□□ 0.21
CLTAP09496 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.37■□□□□ 0.21
CLTAP09496 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.37■□□□□ 0.21
CLTAP09496 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLTAP09496 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLTAP09496 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLTAP09496 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
CLTAP09496 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
CLTAP09496 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CLTAP09496 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC16.36■□□□□ 0.21
CLTAP09496 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
CLTAP09496 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC16.36■□□□□ 0.21
CLTAP09496 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.36■□□□□ 0.21
CLTAP09496 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.36■□□□□ 0.21
CLTAP09496 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 CICP14-201ENST00000629111 2732 ntBASIC16.36■□□□□ 0.21
CLTAP09496 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.36■□□□□ 0.21
CLTAP09496 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.36■□□□□ 0.21
CLTAP09496 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
CLTAP09496 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CLTAP09496 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CLTAP09496 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.36■□□□□ 0.21
CLTAP09496 AL583810.1-201ENST00000553344 1045 ntBASIC16.36■□□□□ 0.21
CLTAP09496 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.36■□□□□ 0.21
CLTAP09496 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
CLTAP09496 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms